Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L2-201ENST00000561772 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L6-201ENST00000626483 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L1-201ENST00000627662 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L8-201ENST00000629013 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L3-201ENST00000630187 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L7-201ENST00000630678 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 DUX4L5-201ENST00000630834 1275 ntBASIC24.16■■□□□ 1.46
RNF216Q9NWF9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
RNF216Q9NWF9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
RNF216Q9NWF9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
RNF216Q9NWF9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RNF216Q9NWF9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 LMO3-212ENST00000535535 1488 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RNF216Q9NWF9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 ANOS2P-203ENST00000472227 1816 ntBASIC24.12■■□□□ 1.45
RNF216Q9NWF9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 MIR6084-201ENST00000622012 110 ntBASIC24.12■■□□□ 1.45
RNF216Q9NWF9 AL031602.1-201ENST00000633169 911 ntBASIC24.12■■□□□ 1.45
RNF216Q9NWF9 RARRES2P11-201ENST00000635158 484 ntBASIC24.12■■□□□ 1.45
RNF216Q9NWF9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RNF216Q9NWF9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 SDR42E1P3-201ENST00000438345 502 ntBASIC24.11■■□□□ 1.45
RNF216Q9NWF9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 CCDC92B-201ENST00000575506 885 ntBASIC24.11■■□□□ 1.45
RNF216Q9NWF9 AC010525.1-201ENST00000585559 441 ntBASIC24.11■■□□□ 1.45
RNF216Q9NWF9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RNF216Q9NWF9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms