Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SLC52A1Q9NWF4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
SLC52A1Q9NWF4 AC069236.1-201ENST00000604339 616 ntBASIC31.02■■■□□ 2.56
SLC52A1Q9NWF4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.02■■■□□ 2.56
SLC52A1Q9NWF4 MYC-209ENST00000641252 345 ntBASIC31.02■■■□□ 2.56
SLC52A1Q9NWF4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SLC52A1Q9NWF4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SLC52A1Q9NWF4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 AC008694.1-202ENST00000636953 945 ntBASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SLC52A1Q9NWF4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 AC016405.3-201ENST00000607710 860 ntBASIC31■■■□□ 2.55
SLC52A1Q9NWF4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31■■■□□ 2.55
SLC52A1Q9NWF4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 AC083880.1-201ENST00000608266 535 ntBASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SLC52A1Q9NWF4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SLC52A1Q9NWF4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SLC52A1Q9NWF4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 AL162412.1-201ENST00000567129 965 ntBASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
SLC52A1Q9NWF4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
SLC52A1Q9NWF4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 BX276092.2-201ENST00000417668 665 ntBASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SLC52A1Q9NWF4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 AC098590.1-201ENST00000468126 897 ntBASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 RARRES2P4-201ENST00000514074 484 ntBASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SLC52A1Q9NWF4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms