Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRDM9Q9NQV7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 AC009237.3-201ENST00000393279 1427 ntBASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 AC087623.3-201ENST00000607047 1098 ntBASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 FAM99A-202ENST00000538190 1989 ntBASIC20.23■□□□□ 0.83
PRDM9Q9NQV7 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRDM9Q9NQV7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRDM9Q9NQV7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 CCDC92B-201ENST00000575506 885 ntBASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 TERF1P2-201ENST00000583350 1212 ntBASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRDM9Q9NQV7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 AC034268.1-201ENST00000441047 882 ntBASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRDM9Q9NQV7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 AC005224.4-201ENST00000583262 1652 ntBASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.18■□□□□ 0.82
PRDM9Q9NQV7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.17■□□□□ 0.82
PRDM9Q9NQV7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms