Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SND1-IT1Q9HBX3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 NTF6A-201ENST00000591175 560 ntBASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 AC009086.3-201ENST00000623486 1008 ntBASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 FEM1AP4-201ENST00000443167 1987 ntBASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 AF106564.1-201ENST00000607058 2553 ntBASIC14.27□□□□□ -0.13
SND1-IT1Q9HBX3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 ABHD17AP5-201ENST00000580133 923 ntBASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 AC010980.1-201ENST00000587192 1142 ntBASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SND1-IT1Q9HBX3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 ATP5G2P3-201ENST00000429083 425 ntBASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SND1-IT1Q9HBX3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 AC005703.6-201ENST00000623265 1329 ntBASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 AC004987.1-201ENST00000428627 508 ntBASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SND1-IT1Q9HBX3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms