Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.73■□□□□ 0.91
CLK4Q9HAZ1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 IGHV3-19-201ENST00000521488 291 ntBASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLK4Q9HAZ1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLK4Q9HAZ1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 AC010141.3-201ENST00000456659 717 ntBASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.7■□□□□ 0.9
CLK4Q9HAZ1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLK4Q9HAZ1 AC092667.1-201ENST00000434301 2586 ntBASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLK4Q9HAZ1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.67■□□□□ 0.9
CLK4Q9HAZ1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms