Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
USB1Q9BQ65 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
USB1Q9BQ65 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
USB1Q9BQ65 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.98■□□□□ 0.63
USB1Q9BQ65 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.98■□□□□ 0.63
USB1Q9BQ65 TPRG1LP1-201ENST00000598702 760 ntBASIC18.98■□□□□ 0.63
USB1Q9BQ65 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 AC009237.3-201ENST00000393279 1427 ntBASIC18.98■□□□□ 0.63
USB1Q9BQ65 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
USB1Q9BQ65 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USB1Q9BQ65 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 KRT18P5-201ENST00000436075 1291 ntBASIC18.97■□□□□ 0.63
USB1Q9BQ65 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USB1Q9BQ65 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
USB1Q9BQ65 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USB1Q9BQ65 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USB1Q9BQ65 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 LINC01960-201ENST00000563759 1884 ntBASIC18.95■□□□□ 0.62
USB1Q9BQ65 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 AC079089.2-201ENST00000531211 1277 ntBASIC18.95■□□□□ 0.62
USB1Q9BQ65 NTF6G-201ENST00000591094 616 ntBASIC18.95■□□□□ 0.62
USB1Q9BQ65 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USB1Q9BQ65 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USB1Q9BQ65 AL391422.3-201ENST00000603791 2761 ntBASIC18.94■□□□□ 0.62
USB1Q9BQ65 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.94■□□□□ 0.62
USB1Q9BQ65 AL034346.1-201ENST00000568244 1277 ntBASIC18.94■□□□□ 0.62
USB1Q9BQ65 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.94■□□□□ 0.62
USB1Q9BQ65 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
USB1Q9BQ65 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
USB1Q9BQ65 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USB1Q9BQ65 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
USB1Q9BQ65 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
USB1Q9BQ65 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
USB1Q9BQ65 AL117328.2-201ENST00000624617 1940 ntBASIC18.93■□□□□ 0.62
USB1Q9BQ65 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USB1Q9BQ65 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms