Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHB18PQ96TA0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 AP001330.3-201ENST00000520123 633 ntBASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 IGHV3-19-201ENST00000521488 291 ntBASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHB18PQ96TA0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHB18PQ96TA0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 AC003102.1-202ENST00000563394 1796 ntBASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 AC005229.4-201ENST00000610085 2198 ntBASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHB18PQ96TA0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHB18PQ96TA0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 EDA-201ENST00000338901 1233 ntBASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 AL034346.1-201ENST00000568244 1277 ntBASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PCDHB18PQ96TA0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 MIR939-201ENST00000401314 82 ntBASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 AC027682.1-201ENST00000562846 899 ntBASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 AF213884.3-201ENST00000563833 479 ntBASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHB18PQ96TA0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 TSPY26P-201ENST00000476365 1326 ntBASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 AL355001.2-201ENST00000620617 1191 ntBASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 AL136967.2-201ENST00000623968 743 ntBASIC22.69■■□□□ 1.22
PCDHB18PQ96TA0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms