Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NEK1Q96PY6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.39■■□□□ 1.66
NEK1Q96PY6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.39■■□□□ 1.66
NEK1Q96PY6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.39■■□□□ 1.66
NEK1Q96PY6 AC105233.4-201ENST00000642045 216 ntBASIC25.39■■□□□ 1.66
NEK1Q96PY6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
NEK1Q96PY6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC25.39■■□□□ 1.65
NEK1Q96PY6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.39■■□□□ 1.65
NEK1Q96PY6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NEK1Q96PY6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NEK1Q96PY6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NEK1Q96PY6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.38■■□□□ 1.65
NEK1Q96PY6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.38■■□□□ 1.65
NEK1Q96PY6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.38■■□□□ 1.65
NEK1Q96PY6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NEK1Q96PY6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NEK1Q96PY6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
NEK1Q96PY6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NEK1Q96PY6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK1Q96PY6 AC244015.2-201ENST00000616358 1861 ntBASIC25.36■■□□□ 1.65
NEK1Q96PY6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.36■■□□□ 1.65
NEK1Q96PY6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK1Q96PY6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NEK1Q96PY6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
NEK1Q96PY6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NEK1Q96PY6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.35■■□□□ 1.65
NEK1Q96PY6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.35■■□□□ 1.65
NEK1Q96PY6 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NEK1Q96PY6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
NEK1Q96PY6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
NEK1Q96PY6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25.34■■□□□ 1.65
NEK1Q96PY6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NEK1Q96PY6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
NEK1Q96PY6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
NEK1Q96PY6 AC007375.3-201ENST00000600936 2314 ntBASIC25.34■■□□□ 1.65
NEK1Q96PY6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.34■■□□□ 1.65
NEK1Q96PY6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
NEK1Q96PY6 AP006587.3-201ENST00000525742 1516 ntBASIC25.33■■□□□ 1.65
NEK1Q96PY6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NEK1Q96PY6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.33■■□□□ 1.65
NEK1Q96PY6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.32■■□□□ 1.64
NEK1Q96PY6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.32■■□□□ 1.64
NEK1Q96PY6 AC003102.1-202ENST00000563394 1796 ntBASIC25.32■■□□□ 1.64
NEK1Q96PY6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.32■■□□□ 1.64
NEK1Q96PY6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NEK1Q96PY6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NEK1Q96PY6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NEK1Q96PY6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.31■■□□□ 1.64
NEK1Q96PY6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NEK1Q96PY6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.3■■□□□ 1.64
NEK1Q96PY6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.3■■□□□ 1.64
NEK1Q96PY6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.3■■□□□ 1.64
NEK1Q96PY6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms