Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DUX3Q96PT4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DUX3Q96PT4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 AC005224.4-201ENST00000583262 1652 ntBASIC16.6■□□□□ 0.25
DUX3Q96PT4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
DUX3Q96PT4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUX3Q96PT4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 AP004607.7-201ENST00000527152 1677 ntBASIC16.59■□□□□ 0.25
DUX3Q96PT4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.59■□□□□ 0.25
DUX3Q96PT4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUX3Q96PT4 LINC00526-201ENST00000581067 1875 ntBASIC16.59■□□□□ 0.25
DUX3Q96PT4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX3Q96PT4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX3Q96PT4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.58■□□□□ 0.25
DUX3Q96PT4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
DUX3Q96PT4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUX3Q96PT4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
DUX3Q96PT4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 OR7E47P-201ENST00000546390 1422 ntBASIC16.58■□□□□ 0.24
DUX3Q96PT4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUX3Q96PT4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DUX3Q96PT4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 AC087742.1-201ENST00000575880 1738 ntBASIC16.57■□□□□ 0.24
DUX3Q96PT4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.57■□□□□ 0.24
DUX3Q96PT4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUX3Q96PT4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX3Q96PT4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUX3Q96PT4 AC009237.3-201ENST00000393279 1427 ntBASIC16.56■□□□□ 0.24
DUX3Q96PT4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DUX3Q96PT4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.56■□□□□ 0.24
DUX3Q96PT4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUX3Q96PT4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.56■□□□□ 0.24
DUX3Q96PT4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUX3Q96PT4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.56■□□□□ 0.24
DUX3Q96PT4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
DUX3Q96PT4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms