Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LINC01521-201ENST00000504184 1943 ntBASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 MIR638-201ENST00000385237 100 ntBASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 AC092171.4-201ENST00000609130 632 ntBASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40AQ8WXH6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 AC009102.2-201ENST00000606772 1639 ntBASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 DUX4L19-201ENST00000557448 1267 ntBASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 CA15P2-201ENST00000611168 834 ntBASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40AQ8WXH6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 UNC93B3-201ENST00000308076 687 ntBASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40AQ8WXH6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 PBX2P1-201ENST00000493219 1291 ntBASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 AC133561.4-201ENST00000566112 224 ntBASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 FEM1AP4-201ENST00000443167 1987 ntBASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB40AQ8WXH6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB40AQ8WXH6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 AL136162.1-201ENST00000607711 1078 ntBASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 AC106739.1-201ENST00000617035 715 ntBASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB40AQ8WXH6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms