Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSMEM1Q8WWF3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 AC004687.1-201ENST00000579003 1625 ntBASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 AL137784.2-201ENST00000607332 1000 ntBASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SSMEM1Q8WWF3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 AC022517.1-201ENST00000592429 346 ntBASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SSMEM1Q8WWF3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
SSMEM1Q8WWF3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SSMEM1Q8WWF3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SSMEM1Q8WWF3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 KRT18P14-201ENST00000534205 1250 ntBASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 TERF1P2-201ENST00000583350 1212 ntBASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSMEM1Q8WWF3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 ESRRAP2-201ENST00000418437 1549 ntBASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSMEM1Q8WWF3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSMEM1Q8WWF3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms