Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PTCD2Q8WV60 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 MIR572-201ENST00000384983 95 ntBASIC21.66■■□□□ 1.06
PTCD2Q8WV60 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PTCD2Q8WV60 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 AL034346.1-201ENST00000568244 1277 ntBASIC21.65■■□□□ 1.06
PTCD2Q8WV60 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 MIR6821-201ENST00000617625 74 ntBASIC21.65■■□□□ 1.06
PTCD2Q8WV60 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.65■■□□□ 1.06
PTCD2Q8WV60 AC244015.2-201ENST00000616358 1861 ntBASIC21.64■■□□□ 1.06
PTCD2Q8WV60 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PTCD2Q8WV60 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTCD2Q8WV60 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PTCD2Q8WV60 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 AC097381.1-201ENST00000429019 1296 ntBASIC21.64■■□□□ 1.05
PTCD2Q8WV60 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCD2Q8WV60 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCD2Q8WV60 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PTCD2Q8WV60 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 AC012414.1-201ENST00000556676 535 ntBASIC21.61■■□□□ 1.05
PTCD2Q8WV60 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCD2Q8WV60 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCD2Q8WV60 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCD2Q8WV60 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms