Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 AC026471.6-201ENST00000622954 1905 ntBASIC33.73■■■□□ 2.99
VPS8Q8N3P4 GXYLT1P2-201ENST00000433312 1230 ntBASIC33.72■■■□□ 2.99
VPS8Q8N3P4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 AC010141.2-201ENST00000452426 721 ntBASIC33.72■■■□□ 2.99
VPS8Q8N3P4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
VPS8Q8N3P4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 AL137784.2-201ENST00000607332 1000 ntBASIC33.71■■■□□ 2.99
VPS8Q8N3P4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
VPS8Q8N3P4 TESC-206ENST00000541210 936 ntTSL 3 BASIC33.7■■■□□ 2.99
VPS8Q8N3P4 ECEL1P1-201ENST00000373592 1742 ntBASIC33.7■■■□□ 2.99
VPS8Q8N3P4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
VPS8Q8N3P4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
VPS8Q8N3P4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 AC012676.1-201ENST00000574705 1949 ntBASIC33.7■■■□□ 2.98
VPS8Q8N3P4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 AC138907.5-202ENST00000569484 235 ntBASIC33.7■■■□□ 2.98
VPS8Q8N3P4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.98
VPS8Q8N3P4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
VPS8Q8N3P4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
VPS8Q8N3P4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC33.69■■■□□ 2.98
VPS8Q8N3P4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC33.69■■■□□ 2.98
VPS8Q8N3P4 AC137761.2-201ENST00000561729 223 ntBASIC33.69■■■□□ 2.98
VPS8Q8N3P4 AC145350.3-201ENST00000569033 163 ntBASIC33.69■■■□□ 2.98
VPS8Q8N3P4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC33.69■■■□□ 2.98
VPS8Q8N3P4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
VPS8Q8N3P4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC33.67■■■□□ 2.98
VPS8Q8N3P4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
VPS8Q8N3P4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC33.67■■■□□ 2.98
VPS8Q8N3P4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
VPS8Q8N3P4 AC003102.1-202ENST00000563394 1796 ntBASIC33.66■■■□□ 2.98
VPS8Q8N3P4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
VPS8Q8N3P4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
VPS8Q8N3P4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 AC053503.5-201ENST00000601508 636 ntBASIC33.64■■■□□ 2.98
VPS8Q8N3P4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
VPS8Q8N3P4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
VPS8Q8N3P4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC33.62■■■□□ 2.97
VPS8Q8N3P4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
VPS8Q8N3P4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC33.62■■■□□ 2.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms