Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM48Q8IWZ4 AC137767.1-201ENST00000602918 1920 ntBASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM48Q8IWZ4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 IKBKGP1-201ENST00000612193 1073 ntBASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM48Q8IWZ4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 AC004854.2-201ENST00000608450 1441 ntBASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 C9orf163-202ENST00000624034 2573 ntBASIC20.92■□□□□ 0.94
TRIM48Q8IWZ4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM48Q8IWZ4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 KRT19P1-201ENST00000405746 1186 ntBASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 AC016769.1-201ENST00000409132 1010 ntBASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 AC137761.2-201ENST00000561729 223 ntBASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 AC145350.3-201ENST00000569033 163 ntBASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM48Q8IWZ4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 C1orf229-201ENST00000623686 2258 ntBASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 AP004607.4-201ENST00000530158 1459 ntBASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 KRT87P-202ENST00000534226 1464 ntBASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM48Q8IWZ4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 AC139530.1-201ENST00000575312 1977 ntBASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms