Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.53■■□□□ 1.04
LYSMD3Q7Z3D4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.52■■□□□ 1.04
LYSMD3Q7Z3D4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD3Q7Z3D4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYSMD3Q7Z3D4 AL034346.1-201ENST00000568244 1277 ntBASIC21.52■■□□□ 1.04
LYSMD3Q7Z3D4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.52■■□□□ 1.04
LYSMD3Q7Z3D4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LYSMD3Q7Z3D4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LYSMD3Q7Z3D4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 FAM99A-202ENST00000538190 1989 ntBASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LYSMD3Q7Z3D4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 MIR6821-201ENST00000617625 74 ntBASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LYSMD3Q7Z3D4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 AC097381.1-201ENST00000429019 1296 ntBASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 YBX1P1-201ENST00000445822 960 ntBASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
LYSMD3Q7Z3D4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 AC009237.3-201ENST00000393279 1427 ntBASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 C11orf96-202ENST00000528572 1834 ntBASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 AC026471.6-201ENST00000622954 1905 ntBASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 AC005224.4-201ENST00000583262 1652 ntBASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LYSMD3Q7Z3D4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 MIR5787-201ENST00000611784 55 ntBASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
LYSMD3Q7Z3D4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms