Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS13CQ709C8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS13CQ709C8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.02■□□□□ 0.47
VPS13CQ709C8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.02■□□□□ 0.47
VPS13CQ709C8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS13CQ709C8 MIR4497-201ENST00000583208 89 ntBASIC18.02■□□□□ 0.47
VPS13CQ709C8 AC006058.3-201ENST00000606217 1069 ntBASIC18.02■□□□□ 0.47
VPS13CQ709C8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS13CQ709C8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.01■□□□□ 0.47
VPS13CQ709C8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18■□□□□ 0.47
VPS13CQ709C8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18■□□□□ 0.47
VPS13CQ709C8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18■□□□□ 0.47
VPS13CQ709C8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
VPS13CQ709C8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18■□□□□ 0.47
VPS13CQ709C8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18■□□□□ 0.47
VPS13CQ709C8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 AC026366.1-201ENST00000488803 879 ntBASIC17.99■□□□□ 0.47
VPS13CQ709C8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
VPS13CQ709C8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.99■□□□□ 0.47
VPS13CQ709C8 AC013268.1-206ENST00000638368 961 ntBASIC17.99■□□□□ 0.47
VPS13CQ709C8 AC112229.1-201ENST00000639295 961 ntBASIC17.99■□□□□ 0.47
VPS13CQ709C8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 LINC01960-201ENST00000563759 1884 ntBASIC17.98■□□□□ 0.47
VPS13CQ709C8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS13CQ709C8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS13CQ709C8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13CQ709C8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13CQ709C8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13CQ709C8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS13CQ709C8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS13CQ709C8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13CQ709C8 AL139125.2-201ENST00000623134 1869 ntBASIC17.97■□□□□ 0.47
VPS13CQ709C8 AC091874.3-201ENST00000512672 1195 ntBASIC17.97■□□□□ 0.47
VPS13CQ709C8 MIR4758-201ENST00000577688 71 ntBASIC17.97■□□□□ 0.47
VPS13CQ709C8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS13CQ709C8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 AL158047.1-201ENST00000445918 881 ntBASIC17.96■□□□□ 0.47
VPS13CQ709C8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13CQ709C8 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13CQ709C8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13CQ709C8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13CQ709C8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS13CQ709C8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.96■□□□□ 0.47
VPS13CQ709C8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms