Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 AL592293.1-201ENST00000502889 1188 ntBASIC13.55□□□□□ -0.24
LINC00575Q6W349 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00575Q6W349 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.55□□□□□ -0.24
LINC00575Q6W349 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 LSM7-203ENST00000585409 512 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00575Q6W349 AC138932.1-201ENST00000534164 6830 ntBASIC13.54□□□□□ -0.24
LINC00575Q6W349 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00575Q6W349 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00575Q6W349 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00575Q6W349 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00575Q6W349 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00575Q6W349 DUX4L9-201ENST00000449051 1259 ntBASIC13.52□□□□□ -0.25
LINC00575Q6W349 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00575Q6W349 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00575Q6W349 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00575Q6W349 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00575Q6W349 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00575Q6W349 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 MIR639-201ENST00000384974 98 ntBASIC13.51□□□□□ -0.25
LINC00575Q6W349 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 GPX1-201ENST00000419349 1106 ntBASIC13.51□□□□□ -0.25
LINC00575Q6W349 DUX4L4-201ENST00000566884 1269 ntBASIC13.51□□□□□ -0.25
LINC00575Q6W349 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms