Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF549Q6P9A3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.26■□□□□ 0.99
ZNF549Q6P9A3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 AC099791.1-201ENST00000416440 715 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 AP001330.3-201ENST00000520123 633 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 AC126544.1-201ENST00000580842 1059 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 SMUG1P1-201ENST00000590640 811 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
ZNF549Q6P9A3 AP004607.7-201ENST00000527152 1677 ntBASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 IGHV3-19-201ENST00000521488 291 ntBASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 AL031432.3-201ENST00000607698 485 ntBASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF549Q6P9A3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF549Q6P9A3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 EDA-201ENST00000338901 1233 ntBASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF549Q6P9A3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 AC027682.1-201ENST00000562846 899 ntBASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF549Q6P9A3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 AL034346.1-201ENST00000568244 1277 ntBASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 AL355001.2-201ENST00000620617 1191 ntBASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF549Q6P9A3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ZNF549Q6P9A3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms