Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 AC055733.4-201ENST00000638462 1354 ntBASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.33■■□□□ 1.49
PPP4R3AQ6IN85 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PPP4R3AQ6IN85 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 LINC02228-203ENST00000641970 1355 ntBASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 AP006587.3-201ENST00000525742 1516 ntBASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 AC097381.1-201ENST00000429019 1296 ntBASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 MIR6821-201ENST00000617625 74 ntBASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 FAM99A-202ENST00000538190 1989 ntBASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PPP4R3AQ6IN85 C11orf96-202ENST00000528572 1834 ntBASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.31■■□□□ 1.48
PPP4R3AQ6IN85 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 CLDN5-201ENST00000403084 2357 ntBASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 TERF1P2-201ENST00000583350 1212 ntBASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPP4R3AQ6IN85 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 AC026271.2-201ENST00000428091 497 ntBASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
PPP4R3AQ6IN85 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPP4R3AQ6IN85 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 RARRES2P6-201ENST00000567333 442 ntBASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.27■■□□□ 1.48
PPP4R3AQ6IN85 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms