Protein–RNA interactions for Protein: Q5TKA1

LIN9, Protein lin-9 homolog, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN9Q5TKA1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LIN9Q5TKA1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 TPRG1LP1-201ENST00000598702 760 ntBASIC23.19■■□□□ 1.3
LIN9Q5TKA1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 AC139530.1-201ENST00000575312 1977 ntBASIC23.19■■□□□ 1.3
LIN9Q5TKA1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.19■■□□□ 1.3
LIN9Q5TKA1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 AC092053.2-201ENST00000640557 1818 ntBASIC23.18■■□□□ 1.3
LIN9Q5TKA1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LIN9Q5TKA1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 AC016769.1-201ENST00000409132 1010 ntBASIC23.17■■□□□ 1.3
LIN9Q5TKA1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 AC010141.3-201ENST00000456659 717 ntBASIC23.17■■□□□ 1.3
LIN9Q5TKA1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 BX005040.4-201ENST00000637145 1518 ntBASIC23.17■■□□□ 1.3
LIN9Q5TKA1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LIN9Q5TKA1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 AC137761.2-201ENST00000561729 223 ntBASIC23.16■■□□□ 1.3
LIN9Q5TKA1 AC145350.3-201ENST00000569033 163 ntBASIC23.16■■□□□ 1.3
LIN9Q5TKA1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
LIN9Q5TKA1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 ID1-201ENST00000376105 1233 ntBASIC23.15■■□□□ 1.3
LIN9Q5TKA1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
LIN9Q5TKA1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LIN9Q5TKA1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
LIN9Q5TKA1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.14■■□□□ 1.3
LIN9Q5TKA1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
LIN9Q5TKA1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
LIN9Q5TKA1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
LIN9Q5TKA1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms