Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 OR7E47P-201ENST00000546390 1422 ntBASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
DEPDC1Q5TB30 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 AL139246.5-201ENST00000606645 996 ntBASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 AL355001.2-201ENST00000620617 1191 ntBASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
DEPDC1Q5TB30 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 AC133561.4-201ENST00000566112 224 ntBASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 AC126544.1-201ENST00000580842 1059 ntBASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
DEPDC1Q5TB30 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.64■□□□□ 0.9
DEPDC1Q5TB30 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
DEPDC1Q5TB30 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 AC099791.1-201ENST00000416440 715 ntBASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 AP001330.3-201ENST00000520123 633 ntBASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 AL031432.3-201ENST00000607698 485 ntBASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DEPDC1Q5TB30 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
DEPDC1Q5TB30 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.61■□□□□ 0.89
DEPDC1Q5TB30 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms