Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 AC073210.2-201ENST00000430369 194 ntBASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 GUSBP6-202ENST00000438529 1198 ntBASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 TERF1P5-201ENST00000477545 1207 ntBASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 AC120498.10-201ENST00000621827 505 ntBASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 AC133041.1-202ENST00000642053 222 ntBASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRTCAP3Q53RY4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 AP006587.3-201ENST00000525742 1516 ntBASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 KRT18P6-201ENST00000555540 1265 ntBASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 AC105036.2-201ENST00000569468 176 ntBASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRTCAP3Q53RY4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
KRTCAP3Q53RY4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 AC008175.2-201ENST00000612840 297 ntBASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRTCAP3Q53RY4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 AC069152.1-201ENST00000438030 544 ntBASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 AC007322.4-201ENST00000509611 723 ntBASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 AL138781.1-201ENST00000566567 1274 ntBASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
KRTCAP3Q53RY4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
KRTCAP3Q53RY4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
KRTCAP3Q53RY4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms