Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 SNT1YCR033W 3681 nt3.22□□□□□ -1.89
CLP1Q08685 VPS3YDR495C 3036 nt3.22□□□□□ -1.89
CLP1Q08685 JIP5YPR169W 1479 nt3.22□□□□□ -1.89
CLP1Q08685 MET10YFR030W 3108 nt3.22□□□□□ -1.89
CLP1Q08685 YIL082W-AYIL082W-A 4497 nt3.21□□□□□ -1.9
CLP1Q08685 tF(GAA)DtF(GAA)D 73 nt3.21□□□□□ -1.9
CLP1Q08685 tF(GAA)NtF(GAA)N 73 nt3.21□□□□□ -1.9
CLP1Q08685 GLG2YJL137C 1143 nt3.21□□□□□ -1.9
CLP1Q08685 REC102YLR329W 795 nt3.21□□□□□ -1.9
CLP1Q08685 YLR462WYLR462W 609 nt3.21□□□□□ -1.9
CLP1Q08685 MFA2YNL145W 117 nt3.21□□□□□ -1.9
CLP1Q08685 NFT1YKR103W 3657 nt3.21□□□□□ -1.9
CLP1Q08685 YPK3YBR028C 1578 nt3.21□□□□□ -1.9
CLP1Q08685 SPT2YER161C 1002 nt3.2□□□□□ -1.9
CLP1Q08685 MOB2YFL034C-B 864 nt3.2□□□□□ -1.9
CLP1Q08685 ERV14YGL054C 417 nt3.2□□□□□ -1.9
CLP1Q08685 EDC1YGL222C 528 nt3.2□□□□□ -1.9
CLP1Q08685 YLR230WYLR230W 306 nt3.2□□□□□ -1.9
CLP1Q08685 GOT1YMR292W 417 nt3.2□□□□□ -1.9
CLP1Q08685 YMR316C-AYMR316C-A 312 nt3.2□□□□□ -1.9
CLP1Q08685 YPR027CYPR027C 834 nt3.2□□□□□ -1.9
CLP1Q08685 PAF1YBR279W 1338 nt3.19□□□□□ -1.9
CLP1Q08685 DBP5YOR046C 1449 nt3.19□□□□□ -1.9
CLP1Q08685 YGR017WYGR017W 894 nt3.19□□□□□ -1.9
CLP1Q08685 YGR273CYGR273C 525 nt3.19□□□□□ -1.9
CLP1Q08685 YIL086CYIL086C 309 nt3.19□□□□□ -1.9
CLP1Q08685 YJL175WYJL175W 513 nt3.19□□□□□ -1.9
CLP1Q08685 MBB1YJL199C 327 nt3.19□□□□□ -1.9
CLP1Q08685 RPL15AYLR029C 615 nt3.19□□□□□ -1.9
CLP1Q08685 CDA2YLR308W 939 nt3.19□□□□□ -1.9
CLP1Q08685 YSF3YNL138W-A 258 nt3.19□□□□□ -1.9
CLP1Q08685 YOR338WYOR338W 1092 nt3.19□□□□□ -1.9
CLP1Q08685 YPR136CYPR136C 513 nt3.19□□□□□ -1.9
CLP1Q08685 NOP4YPL043W 2058 nt3.19□□□□□ -1.9
CLP1Q08685 STU2YLR045C 2667 nt3.19□□□□□ -1.9
CLP1Q08685 TGL3YMR313C 1929 nt3.19□□□□□ -1.9
CLP1Q08685 DSN1YIR010W 1731 nt3.19□□□□□ -1.9
CLP1Q08685 ITC1YGL133W 3795 nt3.18□□□□□ -1.9
CLP1Q08685 JSN1YJR091C 3276 nt3.18□□□□□ -1.9
CLP1Q08685 ERG26YGL001C 1050 nt3.18□□□□□ -1.9
CLP1Q08685 YLR012CYLR012C 300 nt3.18□□□□□ -1.9
CLP1Q08685 YNL013CYNL013C 378 nt3.18□□□□□ -1.9
CLP1Q08685 HHF2YNL030W 312 nt3.18□□□□□ -1.9
CLP1Q08685 AUS1YOR011W 4185 nt3.18□□□□□ -1.9
CLP1Q08685 YEL025CYEL025C 3567 nt3.17□□□□□ -1.9
CLP1Q08685 BUD30YDL151C 582 nt3.17□□□□□ -1.9
CLP1Q08685 YGL082WYGL082W 1146 nt3.17□□□□□ -1.9
CLP1Q08685 BET1YIL004C 429 nt3.17□□□□□ -1.9
CLP1Q08685 PET130YJL023C 1044 nt3.17□□□□□ -1.9
CLP1Q08685 YJR111CYJR111C 852 nt3.17□□□□□ -1.9
CLP1Q08685 YKR011CYKR011C 1062 nt3.17□□□□□ -1.9
CLP1Q08685 RPC37YKR025W 849 nt3.17□□□□□ -1.9
CLP1Q08685 ENV10YLR065C 546 nt3.17□□□□□ -1.9
CLP1Q08685 GIS2YNL255C 462 nt3.17□□□□□ -1.9
CLP1Q08685 MCM16YPR046W 546 nt3.17□□□□□ -1.9
CLP1Q08685 ANT1YPR128C 987 nt3.17□□□□□ -1.9
CLP1Q08685 YCL068CYCL068C 783 nt3.16□□□□□ -1.9
CLP1Q08685 PSF1YDR013W 627 nt3.16□□□□□ -1.9
CLP1Q08685 SDT1YGL224C 843 nt3.16□□□□□ -1.9
CLP1Q08685 TAM41YGR046W 1158 nt3.16□□□□□ -1.9
CLP1Q08685 MAK16YAL025C 921 nt3.16□□□□□ -1.9
CLP1Q08685 RPS21AYKR057W 264 nt3.16□□□□□ -1.9
CLP1Q08685 REX3YLR107W 1215 nt3.16□□□□□ -1.9
CLP1Q08685 MRPL16YBL038W 699 nt3.16□□□□□ -1.9
CLP1Q08685 POS5YPL188W 1245 nt3.16□□□□□ -1.9
CLP1Q08685 BMT2YBR141C 1014 nt3.16□□□□□ -1.9
CLP1Q08685 MIT1YEL007W 2001 nt3.15□□□□□ -1.9
CLP1Q08685 CSR2YPR030W 3366 nt3.15□□□□□ -1.9
CLP1Q08685 TPD3YAL016W 1908 nt3.15□□□□□ -1.9
CLP1Q08685 MDM1YML104C 3384 nt3.15□□□□□ -1.91
CLP1Q08685 MED2YDL005C 1296 nt3.15□□□□□ -1.91
CLP1Q08685 MCM21YDR318W 1107 nt3.15□□□□□ -1.91
CLP1Q08685 YIL025CYIL025C 375 nt3.15□□□□□ -1.91
CLP1Q08685 YIL047C-AYIL047C-A 369 nt3.15□□□□□ -1.91
CLP1Q08685 PIR1YKL164C 1026 nt3.15□□□□□ -1.91
CLP1Q08685 RNH203YLR154C 333 nt3.15□□□□□ -1.91
CLP1Q08685 YIM2YMR151W 438 nt3.15□□□□□ -1.91
CLP1Q08685 EXO84YBR102C 2262 nt3.14□□□□□ -1.91
CLP1Q08685 FUN30YAL019W 3396 nt3.14□□□□□ -1.91
CLP1Q08685 PBS2YJL128C 2007 nt3.14□□□□□ -1.91
CLP1Q08685 SLI1YGR212W 1407 nt3.14□□□□□ -1.91
CLP1Q08685 PUG1YER185W 912 nt3.14□□□□□ -1.91
CLP1Q08685 PAN5YHR063C 1140 nt3.14□□□□□ -1.91
CLP1Q08685 CSM3YMR048W 954 nt3.14□□□□□ -1.91
CLP1Q08685 YNL234WYNL234W 1281 nt3.14□□□□□ -1.91
CLP1Q08685 VPS21YOR089C 633 nt3.14□□□□□ -1.91
CLP1Q08685 YPR053CYPR053C 456 nt3.14□□□□□ -1.91
CLP1Q08685 CHA4YLR098C 1947 nt3.14□□□□□ -1.91
CLP1Q08685 VTC4YJL012C 2166 nt3.14□□□□□ -1.91
CLP1Q08685 CIN1YOR349W 3045 nt3.13□□□□□ -1.91
CLP1Q08685 NSA2YER126C 786 nt3.13□□□□□ -1.91
CLP1Q08685 YHR137C-AYHR137C-A 651 nt3.13□□□□□ -1.91
CLP1Q08685 SPO16YHR153C 597 nt3.13□□□□□ -1.91
CLP1Q08685 YJL028WYJL028W 336 nt3.13□□□□□ -1.91
CLP1Q08685 NDL1YLR254C 570 nt3.13□□□□□ -1.91
CLP1Q08685 YPR203WYPR203W 309 nt3.13□□□□□ -1.91
CLP1Q08685 SIN4YNL236W 2925 nt3.13□□□□□ -1.91
CLP1Q08685 MAL12YGR292W 1755 nt3.12□□□□□ -1.91
CLP1Q08685 MAL32YBR299W 1755 nt3.12□□□□□ -1.91
CLP1Q08685 EPL1YFL024C 2499 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 43.2 ms