Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAB11AP62491 AC103724.3-201ENST00000564481 992 ntBASIC17.31■□□□□ 0.36
RAB11AP62491 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB11AP62491 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11AP62491 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11AP62491 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11AP62491 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB11AP62491 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB11AP62491 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB11AP62491 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11AP62491 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11AP62491 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB11AP62491 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11AP62491 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAB11AP62491 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB11AP62491 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB11AP62491 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB11AP62491 KRT8P33-201ENST00000508125 1423 ntBASIC17.3■□□□□ 0.36
RAB11AP62491 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB11AP62491 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 AL031848.2-201ENST00000607670 837 ntBASIC17.29■□□□□ 0.36
RAB11AP62491 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB11AP62491 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB11AP62491 AL157384.1-201ENST00000445995 2473 ntBASIC17.28■□□□□ 0.36
RAB11AP62491 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11AP62491 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RAB11AP62491 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11AP62491 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RAB11AP62491 BX664725.1-201ENST00000438252 379 ntBASIC17.28■□□□□ 0.36
RAB11AP62491 AC103834.1-201ENST00000520383 144 ntBASIC17.28■□□□□ 0.36
RAB11AP62491 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB11AP62491 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11AP62491 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11AP62491 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11AP62491 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB11AP62491 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB11AP62491 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB11AP62491 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
RAB11AP62491 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB11AP62491 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11AP62491 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB11AP62491 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11AP62491 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.27■□□□□ 0.36
RAB11AP62491 AC012354.3-201ENST00000623734 483 ntBASIC17.27■□□□□ 0.36
RAB11AP62491 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RAB11AP62491 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB11AP62491 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
RAB11AP62491 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11AP62491 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB11AP62491 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB11AP62491 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB11AP62491 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB11AP62491 LINC01521-201ENST00000504184 1943 ntBASIC17.26■□□□□ 0.35
RAB11AP62491 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.26■□□□□ 0.35
RAB11AP62491 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB11AP62491 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB11AP62491 AC021242.3-201ENST00000607598 1377 ntBASIC17.26■□□□□ 0.35
RAB11AP62491 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.26■□□□□ 0.35
RAB11AP62491 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms