Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.49■□□□□ 0.71
CXCR4P61073 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.49■□□□□ 0.71
CXCR4P61073 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.49■□□□□ 0.71
CXCR4P61073 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CXCR4P61073 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CXCR4P61073 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.49■□□□□ 0.71
CXCR4P61073 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CXCR4P61073 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CXCR4P61073 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.49■□□□□ 0.71
CXCR4P61073 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CXCR4P61073 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CXCR4P61073 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CXCR4P61073 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CXCR4P61073 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CXCR4P61073 C17orf82-201ENST00000623772 1530 ntBASIC19.48■□□□□ 0.71
CXCR4P61073 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.48■□□□□ 0.71
CXCR4P61073 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CXCR4P61073 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.48■□□□□ 0.71
CXCR4P61073 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.48■□□□□ 0.71
CXCR4P61073 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CXCR4P61073 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CXCR4P61073 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.47■□□□□ 0.71
CXCR4P61073 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 AC004687.1-201ENST00000579003 1625 ntBASIC19.47■□□□□ 0.71
CXCR4P61073 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CXCR4P61073 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CXCR4P61073 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CXCR4P61073 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.47■□□□□ 0.71
CXCR4P61073 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CXCR4P61073 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.46■□□□□ 0.71
CXCR4P61073 AC021242.3-201ENST00000607598 1377 ntBASIC19.46■□□□□ 0.71
CXCR4P61073 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 GABARAPL3-202ENST00000624044 1851 ntBASIC19.46■□□□□ 0.71
CXCR4P61073 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CXCR4P61073 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.46■□□□□ 0.71
CXCR4P61073 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.46■□□□□ 0.71
CXCR4P61073 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CXCR4P61073 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.45■□□□□ 0.7
CXCR4P61073 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.45■□□□□ 0.7
CXCR4P61073 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CXCR4P61073 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.45■□□□□ 0.7
CXCR4P61073 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CXCR4P61073 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
CXCR4P61073 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
CXCR4P61073 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CXCR4P61073 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
CXCR4P61073 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CXCR4P61073 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CXCR4P61073 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.44■□□□□ 0.7
CXCR4P61073 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CXCR4P61073 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CXCR4P61073 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CXCR4P61073 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms