Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.1■□□□□ 0.97
SRP54P61011 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.1■□□□□ 0.97
SRP54P61011 AC073111.5-205ENST00000641717 521 ntBASIC21.1■□□□□ 0.97
SRP54P61011 AC133561.1-201ENST00000568600 2415 ntBASIC21.1■□□□□ 0.97
SRP54P61011 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRP54P61011 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.09■□□□□ 0.97
SRP54P61011 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 CDCA4P2-201ENST00000441182 718 ntBASIC21.09■□□□□ 0.97
SRP54P61011 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.09■□□□□ 0.97
SRP54P61011 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.09■□□□□ 0.97
SRP54P61011 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.09■□□□□ 0.97
SRP54P61011 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRP54P61011 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.09■□□□□ 0.97
SRP54P61011 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRP54P61011 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.08■□□□□ 0.97
SRP54P61011 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRP54P61011 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRP54P61011 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SRP54P61011 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SRP54P61011 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.08■□□□□ 0.97
SRP54P61011 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRP54P61011 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SRP54P61011 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.08■□□□□ 0.96
SRP54P61011 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SRP54P61011 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
SRP54P61011 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SRP54P61011 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SRP54P61011 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SRP54P61011 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.07■□□□□ 0.96
SRP54P61011 AC011767.1-201ENST00000617410 1153 ntBASIC21.07■□□□□ 0.96
SRP54P61011 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SRP54P61011 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRP54P61011 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SRP54P61011 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.06■□□□□ 0.96
SRP54P61011 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.06■□□□□ 0.96
SRP54P61011 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.06■□□□□ 0.96
SRP54P61011 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.06■□□□□ 0.96
SRP54P61011 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.06■□□□□ 0.96
SRP54P61011 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.06■□□□□ 0.96
SRP54P61011 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.06■□□□□ 0.96
SRP54P61011 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 AP001160.3-201ENST00000601484 763 ntBASIC21.06■□□□□ 0.96
SRP54P61011 RAP2CP1-201ENST00000605103 478 ntBASIC21.06■□□□□ 0.96
SRP54P61011 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SRP54P61011 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
SRP54P61011 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SRP54P61011 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
SRP54P61011 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SRP54P61011 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.05■□□□□ 0.96
SRP54P61011 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
SRP54P61011 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SRP54P61011 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 ID1-201ENST00000376105 1233 ntBASIC21.05■□□□□ 0.96
SRP54P61011 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.05■□□□□ 0.96
SRP54P61011 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SRP54P61011 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRP54P61011 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.05■□□□□ 0.96
SRP54P61011 AP006587.3-201ENST00000525742 1516 ntBASIC21.04■□□□□ 0.96
SRP54P61011 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRP54P61011 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SRP54P61011 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SRP54P61011 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SRP54P61011 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
SRP54P61011 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRP54P61011 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRP54P61011 AC026185.1-201ENST00000445748 174 ntBASIC21.04■□□□□ 0.96
SRP54P61011 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.04■□□□□ 0.96
SRP54P61011 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SRP54P61011 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.04■□□□□ 0.96
SRP54P61011 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.04■□□□□ 0.96
SRP54P61011 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.04■□□□□ 0.96
SRP54P61011 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.04■□□□□ 0.96
SRP54P61011 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.04■□□□□ 0.96
SRP54P61011 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms