Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
SPCS3P61009 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SPCS3P61009 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.33■□□□□ 0.36
SPCS3P61009 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SPCS3P61009 MIR4787-201ENST00000607364 84 ntBASIC17.33■□□□□ 0.36
SPCS3P61009 AC010997.5-201ENST00000609182 354 ntBASIC17.33■□□□□ 0.36
SPCS3P61009 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SPCS3P61009 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.33■□□□□ 0.36
SPCS3P61009 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SPCS3P61009 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SPCS3P61009 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS3P61009 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.33■□□□□ 0.36
SPCS3P61009 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
SPCS3P61009 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SPCS3P61009 Z98882.1-201ENST00000622160 2253 ntBASIC17.32■□□□□ 0.36
SPCS3P61009 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPCS3P61009 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPCS3P61009 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPCS3P61009 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS3P61009 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.31■□□□□ 0.36
SPCS3P61009 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.31■□□□□ 0.36
SPCS3P61009 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.31■□□□□ 0.36
SPCS3P61009 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.31■□□□□ 0.36
SPCS3P61009 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SPCS3P61009 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SPCS3P61009 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.31■□□□□ 0.36
SPCS3P61009 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.31■□□□□ 0.36
SPCS3P61009 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.31■□□□□ 0.36
SPCS3P61009 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS3P61009 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SPCS3P61009 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SPCS3P61009 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.3■□□□□ 0.36
SPCS3P61009 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.3■□□□□ 0.36
SPCS3P61009 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.3■□□□□ 0.36
SPCS3P61009 AC079089.2-201ENST00000531211 1277 ntBASIC17.3■□□□□ 0.36
SPCS3P61009 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 AC007952.6-201ENST00000573168 2673 ntBASIC17.3■□□□□ 0.36
SPCS3P61009 AC003957.1-201ENST00000625108 2673 ntBASIC17.3■□□□□ 0.36
SPCS3P61009 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS3P61009 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.29■□□□□ 0.36
SPCS3P61009 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.29■□□□□ 0.36
SPCS3P61009 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.29■□□□□ 0.36
SPCS3P61009 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.29■□□□□ 0.36
SPCS3P61009 AC241377.3-202ENST00000626088 1088 ntBASIC17.29■□□□□ 0.36
SPCS3P61009 AC241585.3-202ENST00000628937 1088 ntBASIC17.29■□□□□ 0.36
SPCS3P61009 AC245100.8-202ENST00000629247 1058 ntBASIC17.29■□□□□ 0.36
SPCS3P61009 AL031602.1-201ENST00000633169 911 ntBASIC17.29■□□□□ 0.36
SPCS3P61009 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
SPCS3P61009 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SPCS3P61009 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SPCS3P61009 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS3P61009 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS3P61009 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS3P61009 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS3P61009 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS3P61009 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SPCS3P61009 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms