Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN3P54252 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.75■■□□□ 1.07
ATXN3P54252 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.75■■□□□ 1.07
ATXN3P54252 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATXN3P54252 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ATXN3P54252 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.74■■□□□ 1.07
ATXN3P54252 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3P54252 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 ABHD17AP1-201ENST00000358206 933 ntBASIC21.74■■□□□ 1.07
ATXN3P54252 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.74■■□□□ 1.07
ATXN3P54252 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.74■■□□□ 1.07
ATXN3P54252 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3P54252 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ATXN3P54252 AC007375.3-201ENST00000600936 2314 ntBASIC21.74■■□□□ 1.07
ATXN3P54252 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.74■■□□□ 1.07
ATXN3P54252 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATXN3P54252 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3P54252 AC004854.2-201ENST00000608450 1441 ntBASIC21.73■■□□□ 1.07
ATXN3P54252 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3P54252 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3P54252 AP004607.4-201ENST00000530158 1459 ntBASIC21.73■■□□□ 1.07
ATXN3P54252 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3P54252 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.73■■□□□ 1.07
ATXN3P54252 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3P54252 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN3P54252 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.73■■□□□ 1.07
ATXN3P54252 KRT18P61-201ENST00000585825 1298 ntBASIC21.73■■□□□ 1.07
ATXN3P54252 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.73■■□□□ 1.07
ATXN3P54252 DUSP8P3-201ENST00000399571 1760 ntBASIC21.73■■□□□ 1.07
ATXN3P54252 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATXN3P54252 LINC00526-201ENST00000581067 1875 ntBASIC21.73■■□□□ 1.07
ATXN3P54252 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATXN3P54252 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.72■■□□□ 1.07
ATXN3P54252 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ATXN3P54252 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATXN3P54252 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 KRT18P11-201ENST00000435214 1283 ntBASIC21.72■■□□□ 1.07
ATXN3P54252 TPRG1LP1-201ENST00000598702 760 ntBASIC21.72■■□□□ 1.07
ATXN3P54252 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.72■■□□□ 1.07
ATXN3P54252 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.72■■□□□ 1.07
ATXN3P54252 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.72■■□□□ 1.07
ATXN3P54252 AC144652.1-201ENST00000609974 1624 ntBASIC21.72■■□□□ 1.07
ATXN3P54252 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATXN3P54252 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.71■■□□□ 1.07
ATXN3P54252 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ATXN3P54252 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.71■■□□□ 1.07
ATXN3P54252 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.71■■□□□ 1.07
ATXN3P54252 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
ATXN3P54252 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATXN3P54252 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATXN3P54252 BX005040.4-201ENST00000637145 1518 ntBASIC21.7■■□□□ 1.07
ATXN3P54252 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
ATXN3P54252 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.7■■□□□ 1.06
ATXN3P54252 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.7■■□□□ 1.06
ATXN3P54252 TMEM191A-211ENST00000637163 1067 ntBASIC21.7■■□□□ 1.06
ATXN3P54252 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
ATXN3P54252 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATXN3P54252 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
ATXN3P54252 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3P54252 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3P54252 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3P54252 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATXN3P54252 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
ATXN3P54252 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN3P54252 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATXN3P54252 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN3P54252 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.69■■□□□ 1.06
ATXN3P54252 CROCCP5-201ENST00000436658 830 ntBASIC21.69■■□□□ 1.06
ATXN3P54252 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.69■■□□□ 1.06
ATXN3P54252 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.69■■□□□ 1.06
ATXN3P54252 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.69■■□□□ 1.06
ATXN3P54252 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms