Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ACLYP53396 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.82■■□□□ 1.4
ACLYP53396 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
ACLYP53396 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
ACLYP53396 AL034346.1-201ENST00000568244 1277 ntBASIC23.82■■□□□ 1.4
ACLYP53396 AC069236.1-201ENST00000604339 616 ntBASIC23.82■■□□□ 1.4
ACLYP53396 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ACLYP53396 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.82■■□□□ 1.4
ACLYP53396 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ACLYP53396 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
ACLYP53396 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.81■■□□□ 1.4
ACLYP53396 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
ACLYP53396 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.81■■□□□ 1.4
ACLYP53396 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.81■■□□□ 1.4
ACLYP53396 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.81■■□□□ 1.4
ACLYP53396 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
ACLYP53396 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ACLYP53396 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.8■■□□□ 1.4
ACLYP53396 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ACLYP53396 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.8■■□□□ 1.4
ACLYP53396 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACLYP53396 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ACLYP53396 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.8■■□□□ 1.4
ACLYP53396 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.8■■□□□ 1.4
ACLYP53396 BX276092.2-201ENST00000417668 665 ntBASIC23.8■■□□□ 1.4
ACLYP53396 RPS2P52-201ENST00000469610 820 ntBASIC23.8■■□□□ 1.4
ACLYP53396 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.8■■□□□ 1.4
ACLYP53396 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ACLYP53396 AC092068.2-201ENST00000590491 1708 ntBASIC23.8■■□□□ 1.4
ACLYP53396 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ACLYP53396 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.8■■□□□ 1.4
ACLYP53396 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ACLYP53396 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.79■■□□□ 1.4
ACLYP53396 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ACLYP53396 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.79■■□□□ 1.4
ACLYP53396 RARRES2P4-201ENST00000514074 484 ntBASIC23.79■■□□□ 1.4
ACLYP53396 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.79■■□□□ 1.4
ACLYP53396 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
ACLYP53396 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 LINC00526-201ENST00000581067 1875 ntBASIC23.79■■□□□ 1.4
ACLYP53396 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ACLYP53396 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.78■■□□□ 1.4
ACLYP53396 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.78■■□□□ 1.4
ACLYP53396 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
ACLYP53396 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
ACLYP53396 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.78■■□□□ 1.4
ACLYP53396 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.78■■□□□ 1.4
ACLYP53396 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.78■■□□□ 1.4
ACLYP53396 AC083880.1-201ENST00000608266 535 ntBASIC23.78■■□□□ 1.4
ACLYP53396 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ACLYP53396 AP006587.3-201ENST00000525742 1516 ntBASIC23.78■■□□□ 1.4
ACLYP53396 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ACLYP53396 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
ACLYP53396 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.77■■□□□ 1.4
ACLYP53396 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.77■■□□□ 1.4
ACLYP53396 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.77■■□□□ 1.4
ACLYP53396 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ACLYP53396 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ACLYP53396 DUSP5P2-201ENST00000426873 1033 ntBASIC23.76■■□□□ 1.39
ACLYP53396 AC098590.1-201ENST00000468126 897 ntBASIC23.76■■□□□ 1.39
ACLYP53396 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.76■■□□□ 1.39
ACLYP53396 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.76■■□□□ 1.39
ACLYP53396 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.76■■□□□ 1.39
ACLYP53396 MYC-209ENST00000641252 345 ntBASIC23.76■■□□□ 1.39
ACLYP53396 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ACLYP53396 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ACLYP53396 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.75■■□□□ 1.39
ACLYP53396 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms