Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.89■■□□□ 1.41
CPT1AP50416 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CPT1AP50416 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPT1AP50416 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPT1AP50416 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CPT1AP50416 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CPT1AP50416 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.87■■□□□ 1.41
CPT1AP50416 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.87■■□□□ 1.41
CPT1AP50416 AC007322.4-201ENST00000509611 723 ntBASIC23.87■■□□□ 1.41
CPT1AP50416 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.87■■□□□ 1.41
CPT1AP50416 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.87■■□□□ 1.41
CPT1AP50416 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.87■■□□□ 1.41
CPT1AP50416 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.87■■□□□ 1.41
CPT1AP50416 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.87■■□□□ 1.41
CPT1AP50416 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CPT1AP50416 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.87■■□□□ 1.41
CPT1AP50416 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CPT1AP50416 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
CPT1AP50416 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
CPT1AP50416 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.86■■□□□ 1.41
CPT1AP50416 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.86■■□□□ 1.41
CPT1AP50416 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.86■■□□□ 1.41
CPT1AP50416 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.86■■□□□ 1.41
CPT1AP50416 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CPT1AP50416 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPT1AP50416 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CPT1AP50416 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.85■■□□□ 1.41
CPT1AP50416 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPT1AP50416 CYP2T1P-201ENST00000432607 1285 ntBASIC23.85■■□□□ 1.41
CPT1AP50416 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.85■■□□□ 1.41
CPT1AP50416 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPT1AP50416 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CPT1AP50416 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.85■■□□□ 1.41
CPT1AP50416 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CPT1AP50416 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.85■■□□□ 1.41
CPT1AP50416 AC068338.2-201ENST00000563278 1430 ntBASIC23.84■■□□□ 1.41
CPT1AP50416 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 AC120498.10-201ENST00000621827 505 ntBASIC23.84■■□□□ 1.41
CPT1AP50416 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CPT1AP50416 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CPT1AP50416 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.83■■□□□ 1.41
CPT1AP50416 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.83■■□□□ 1.41
CPT1AP50416 MIR4758-201ENST00000577688 71 ntBASIC23.83■■□□□ 1.41
CPT1AP50416 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.83■■□□□ 1.41
CPT1AP50416 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.83■■□□□ 1.41
CPT1AP50416 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CPT1AP50416 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CPT1AP50416 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPT1AP50416 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.82■■□□□ 1.4
CPT1AP50416 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CPT1AP50416 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.82■■□□□ 1.4
CPT1AP50416 AC008175.2-201ENST00000612840 297 ntBASIC23.82■■□□□ 1.4
CPT1AP50416 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPT1AP50416 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
CPT1AP50416 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CPT1AP50416 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CPT1AP50416 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
CPT1AP50416 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.81■■□□□ 1.4
CPT1AP50416 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.81■■□□□ 1.4
CPT1AP50416 OR10C1-204ENST00000622521 1039 ntBASIC23.81■■□□□ 1.4
CPT1AP50416 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPT1AP50416 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CPT1AP50416 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CPT1AP50416 AC137767.1-201ENST00000602918 1920 ntBASIC23.8■■□□□ 1.4
CPT1AP50416 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPT1AP50416 MKRN4P-201ENST00000444706 1521 ntBASIC23.8■■□□□ 1.4
CPT1AP50416 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPT1AP50416 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.8■■□□□ 1.4
CPT1AP50416 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.8■■□□□ 1.4
CPT1AP50416 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.8■■□□□ 1.4
CPT1AP50416 AC098934.4-201ENST00000564127 592 ntBASIC23.8■■□□□ 1.4
CPT1AP50416 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms