Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRIM2P49643 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRIM2P49643 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRIM2P49643 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.28■□□□□ 0.84
PRIM2P49643 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRIM2P49643 AC026310.3-201ENST00000625186 2373 ntBASIC20.28■□□□□ 0.84
PRIM2P49643 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.27■□□□□ 0.84
PRIM2P49643 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
PRIM2P49643 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.27■□□□□ 0.84
PRIM2P49643 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PRIM2P49643 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.27■□□□□ 0.84
PRIM2P49643 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.27■□□□□ 0.84
PRIM2P49643 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PRIM2P49643 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRIM2P49643 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRIM2P49643 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PRIM2P49643 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRIM2P49643 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PRIM2P49643 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PRIM2P49643 AC008406.3-201ENST00000620001 1374 ntBASIC20.26■□□□□ 0.83
PRIM2P49643 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.26■□□□□ 0.83
PRIM2P49643 AC079089.2-201ENST00000531211 1277 ntBASIC20.26■□□□□ 0.83
PRIM2P49643 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRIM2P49643 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.26■□□□□ 0.83
PRIM2P49643 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRIM2P49643 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.26■□□□□ 0.83
PRIM2P49643 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.26■□□□□ 0.83
PRIM2P49643 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PRIM2P49643 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PRIM2P49643 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 AC244015.2-201ENST00000616358 1861 ntBASIC20.25■□□□□ 0.83
PRIM2P49643 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PRIM2P49643 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PRIM2P49643 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 AC010525.1-201ENST00000585559 441 ntBASIC20.25■□□□□ 0.83
PRIM2P49643 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PRIM2P49643 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRIM2P49643 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.25■□□□□ 0.83
PRIM2P49643 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.24■□□□□ 0.83
PRIM2P49643 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 AC010141.3-201ENST00000456659 717 ntBASIC20.24■□□□□ 0.83
PRIM2P49643 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.24■□□□□ 0.83
PRIM2P49643 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.24■□□□□ 0.83
PRIM2P49643 AL121603.2-201ENST00000557373 2117 ntBASIC20.24■□□□□ 0.83
PRIM2P49643 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRIM2P49643 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PRIM2P49643 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.23■□□□□ 0.83
PRIM2P49643 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PRIM2P49643 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.23■□□□□ 0.83
PRIM2P49643 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
PRIM2P49643 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
PRIM2P49643 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.23■□□□□ 0.83
PRIM2P49643 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRIM2P49643 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRIM2P49643 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms