Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RPL13AP40429 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPL13AP40429 ECEL1P2-201ENST00000461596 1295 ntBASIC14.78□□□□□ -0.04
RPL13AP40429 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.78□□□□□ -0.04
RPL13AP40429 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RPL13AP40429 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.78□□□□□ -0.04
RPL13AP40429 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL13AP40429 HTR7P1-202ENST00000624664 4411 ntBASIC14.78□□□□□ -0.04
RPL13AP40429 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.77□□□□□ -0.04
RPL13AP40429 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC14.77□□□□□ -0.04
RPL13AP40429 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.77□□□□□ -0.04
RPL13AP40429 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL13AP40429 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.77□□□□□ -0.04
RPL13AP40429 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
RPL13AP40429 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RPL13AP40429 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL13AP40429 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RPL13AP40429 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RPL13AP40429 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL13AP40429 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RPL13AP40429 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL13AP40429 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL13AP40429 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RPL13AP40429 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RPL13AP40429 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL13AP40429 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.76□□□□□ -0.05
RPL13AP40429 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 AC092296.2-201ENST00000589470 999 ntBASIC14.76□□□□□ -0.05
RPL13AP40429 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RPL13AP40429 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL13AP40429 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL13AP40429 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL13AP40429 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RPL13AP40429 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
RPL13AP40429 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.75□□□□□ -0.05
RPL13AP40429 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RPL13AP40429 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RPL13AP40429 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RPL13AP40429 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPL13AP40429 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL13AP40429 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.74□□□□□ -0.05
RPL13AP40429 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RPL13AP40429 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL13AP40429 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
RPL13AP40429 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL13AP40429 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPL13AP40429 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPL13AP40429 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.74□□□□□ -0.05
RPL13AP40429 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPL13AP40429 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RPL13AP40429 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RPL13AP40429 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RPL13AP40429 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPL13AP40429 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL13AP40429 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPL13AP40429 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL13AP40429 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL13AP40429 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.73□□□□□ -0.05
RPL13AP40429 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPL13AP40429 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPL13AP40429 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms