Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A4P31645 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.06■■□□□ 1.12
SLC6A4P31645 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC6A4P31645 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC6A4P31645 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC6A4P31645 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC6A4P31645 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.06■■□□□ 1.12
SLC6A4P31645 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 AC092053.2-201ENST00000640557 1818 ntBASIC22.06■■□□□ 1.12
SLC6A4P31645 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A4P31645 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.06■■□□□ 1.12
SLC6A4P31645 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC6A4P31645 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC6A4P31645 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.05■■□□□ 1.12
SLC6A4P31645 AC104187.1-201ENST00000607510 612 ntBASIC22.05■■□□□ 1.12
SLC6A4P31645 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A4P31645 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
SLC6A4P31645 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A4P31645 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC6A4P31645 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A4P31645 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.04■■□□□ 1.12
SLC6A4P31645 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.04■■□□□ 1.12
SLC6A4P31645 AL137784.2-201ENST00000607332 1000 ntBASIC22.04■■□□□ 1.12
SLC6A4P31645 GUSBP5-202ENST00000510805 1989 ntBASIC22.04■■□□□ 1.12
SLC6A4P31645 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A4P31645 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A4P31645 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A4P31645 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
SLC6A4P31645 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A4P31645 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC6A4P31645 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.03■■□□□ 1.12
SLC6A4P31645 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.03■■□□□ 1.12
SLC6A4P31645 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SLC6A4P31645 AC133561.1-201ENST00000568600 2415 ntBASIC22.03■■□□□ 1.12
SLC6A4P31645 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
SLC6A4P31645 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SLC6A4P31645 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SLC6A4P31645 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 KRT19P1-201ENST00000405746 1186 ntBASIC22.02■■□□□ 1.12
SLC6A4P31645 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC6A4P31645 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A4P31645 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SLC6A4P31645 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.02■■□□□ 1.12
SLC6A4P31645 AC026471.6-201ENST00000622954 1905 ntBASIC22.02■■□□□ 1.11
SLC6A4P31645 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SLC6A4P31645 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SLC6A4P31645 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC6A4P31645 AC004911.1-201ENST00000416316 871 ntBASIC22.01■■□□□ 1.11
SLC6A4P31645 AC137761.2-201ENST00000561729 223 ntBASIC22.01■■□□□ 1.11
SLC6A4P31645 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC6A4P31645 AC145350.3-201ENST00000569033 163 ntBASIC22.01■■□□□ 1.11
SLC6A4P31645 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A4P31645 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A4P31645 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC6A4P31645 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A4P31645 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A4P31645 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SLC6A4P31645 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A4P31645 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A4P31645 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A4P31645 AC006015.1-201ENST00000429970 570 ntBASIC22■■□□□ 1.11
SLC6A4P31645 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A4P31645 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A4P31645 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A4P31645 AC242852.2-201ENST00000615738 1807 ntBASIC22■■□□□ 1.11
SLC6A4P31645 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
SLC6A4P31645 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms