Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SHC1P29353 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.58■□□□□ 0.72
SHC1P29353 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHC1P29353 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.58■□□□□ 0.72
SHC1P29353 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SHC1P29353 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 OXCT2P1-201ENST00000447263 1535 ntBASIC19.57■□□□□ 0.72
SHC1P29353 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHC1P29353 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC1P29353 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.57■□□□□ 0.72
SHC1P29353 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.57■□□□□ 0.72
SHC1P29353 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC1P29353 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC1P29353 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC1P29353 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.57■□□□□ 0.72
SHC1P29353 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC1P29353 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHC1P29353 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.56■□□□□ 0.72
SHC1P29353 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC1P29353 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC1P29353 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SHC1P29353 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC1P29353 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC1P29353 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC1P29353 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC1P29353 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 MIR572-201ENST00000384983 95 ntBASIC19.55■□□□□ 0.72
SHC1P29353 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.55■□□□□ 0.72
SHC1P29353 AC079089.2-201ENST00000531211 1277 ntBASIC19.55■□□□□ 0.72
SHC1P29353 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.55■□□□□ 0.72
SHC1P29353 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SHC1P29353 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC1P29353 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC1P29353 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SHC1P29353 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
SHC1P29353 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 IRS3P-201ENST00000223076 1006 ntBASIC19.54■□□□□ 0.72
SHC1P29353 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.54■□□□□ 0.72
SHC1P29353 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
SHC1P29353 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC1P29353 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC1P29353 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.54■□□□□ 0.72
SHC1P29353 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC1P29353 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.53■□□□□ 0.72
SHC1P29353 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC1P29353 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.53■□□□□ 0.72
SHC1P29353 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.53■□□□□ 0.72
SHC1P29353 SMUG1P1-201ENST00000590640 811 ntBASIC19.53■□□□□ 0.72
SHC1P29353 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.53■□□□□ 0.72
SHC1P29353 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHC1P29353 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SHC1P29353 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHC1P29353 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.52■□□□□ 0.72
SHC1P29353 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC1P29353 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC1P29353 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHC1P29353 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.52■□□□□ 0.72
SHC1P29353 MIR6084-201ENST00000622012 110 ntBASIC19.52■□□□□ 0.72
SHC1P29353 AC105233.4-201ENST00000642045 216 ntBASIC19.52■□□□□ 0.72
SHC1P29353 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHC1P29353 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHC1P29353 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHC1P29353 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHC1P29353 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.51■□□□□ 0.71
SHC1P29353 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
SHC1P29353 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.51■□□□□ 0.71
SHC1P29353 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms