Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 LINC02228-203ENST00000641970 1355 ntBASIC20.35■□□□□ 0.85
ZNF888P0CJ79 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 AC123595.1-201ENST00000440769 1046 ntBASIC20.35■□□□□ 0.85
ZNF888P0CJ79 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
ZNF888P0CJ79 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF888P0CJ79 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.34■□□□□ 0.85
ZNF888P0CJ79 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 RARRES2P6-201ENST00000567333 442 ntBASIC20.33■□□□□ 0.85
ZNF888P0CJ79 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.33■□□□□ 0.85
ZNF888P0CJ79 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ZNF888P0CJ79 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
ZNF888P0CJ79 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.33■□□□□ 0.84
ZNF888P0CJ79 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF888P0CJ79 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 MIR935-201ENST00000401179 91 ntBASIC20.32■□□□□ 0.84
ZNF888P0CJ79 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 CCDC92B-201ENST00000575506 885 ntBASIC20.32■□□□□ 0.84
ZNF888P0CJ79 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 AC055733.4-201ENST00000638462 1354 ntBASIC20.32■□□□□ 0.84
ZNF888P0CJ79 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF888P0CJ79 AC079834.2-201ENST00000609776 1949 ntBASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 AC097381.1-201ENST00000429019 1296 ntBASIC20.31■□□□□ 0.84
ZNF888P0CJ79 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF888P0CJ79 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.3■□□□□ 0.84
ZNF888P0CJ79 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms