Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC1P07992 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.9■□□□□ 0.62
ERCC1P07992 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.9■□□□□ 0.62
ERCC1P07992 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC1P07992 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC1P07992 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.89■□□□□ 0.62
ERCC1P07992 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC1P07992 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ERCC1P07992 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC1P07992 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC1P07992 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC1P07992 MIR5787-201ENST00000611784 55 ntBASIC18.89■□□□□ 0.61
ERCC1P07992 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ERCC1P07992 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC1P07992 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ERCC1P07992 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.88■□□□□ 0.61
ERCC1P07992 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ERCC1P07992 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.88■□□□□ 0.61
ERCC1P07992 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
ERCC1P07992 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC1P07992 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ERCC1P07992 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.88■□□□□ 0.61
ERCC1P07992 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
ERCC1P07992 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ERCC1P07992 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC1P07992 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ERCC1P07992 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC1P07992 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ERCC1P07992 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC1P07992 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC1P07992 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC1P07992 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC1P07992 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.86■□□□□ 0.61
ERCC1P07992 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC1P07992 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC1P07992 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC1P07992 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC1P07992 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC1P07992 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ERCC1P07992 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ERCC1P07992 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ERCC1P07992 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 SLC47A1P1-202ENST00000449666 945 ntBASIC18.85■□□□□ 0.61
ERCC1P07992 OR2I1P-207ENST00000453522 948 ntBASIC18.85■□□□□ 0.61
ERCC1P07992 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC1P07992 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC1P07992 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.85■□□□□ 0.61
ERCC1P07992 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.85■□□□□ 0.61
ERCC1P07992 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ERCC1P07992 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC1P07992 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.85■□□□□ 0.61
ERCC1P07992 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ERCC1P07992 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC1P07992 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC1P07992 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.84■□□□□ 0.61
ERCC1P07992 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.84■□□□□ 0.61
ERCC1P07992 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.84■□□□□ 0.61
ERCC1P07992 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC1P07992 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC1P07992 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC1P07992 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC1P07992 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC1P07992 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC1P07992 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
ERCC1P07992 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC1P07992 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
ERCC1P07992 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC1P07992 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms