Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21■□□□□ 0.95
CAPN1P07384 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CAPN1P07384 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21■□□□□ 0.95
CAPN1P07384 ANKRD20A6P-201ENST00000618763 204 ntBASIC21■□□□□ 0.95
CAPN1P07384 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CAPN1P07384 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21■□□□□ 0.95
CAPN1P07384 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21■□□□□ 0.95
CAPN1P07384 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CAPN1P07384 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.99■□□□□ 0.95
CAPN1P07384 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.99■□□□□ 0.95
CAPN1P07384 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.99■□□□□ 0.95
CAPN1P07384 FAM99A-202ENST00000538190 1989 ntBASIC20.99■□□□□ 0.95
CAPN1P07384 TSPY26P-201ENST00000476365 1326 ntBASIC20.99■□□□□ 0.95
CAPN1P07384 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CAPN1P07384 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.99■□□□□ 0.95
CAPN1P07384 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CAPN1P07384 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 AC010525.1-201ENST00000585559 441 ntBASIC20.98■□□□□ 0.95
CAPN1P07384 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CAPN1P07384 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.98■□□□□ 0.95
CAPN1P07384 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPN1P07384 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 PKD1P6-201ENST00000343738 4769 ntBASIC20.98■□□□□ 0.95
CAPN1P07384 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.98■□□□□ 0.95
CAPN1P07384 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CAPN1P07384 AL137060.1-201ENST00000618151 2648 ntBASIC20.97■□□□□ 0.95
CAPN1P07384 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.97■□□□□ 0.95
CAPN1P07384 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CAPN1P07384 AC104564.3-201ENST00000582367 638 ntBASIC20.97■□□□□ 0.95
CAPN1P07384 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.97■□□□□ 0.95
CAPN1P07384 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPN1P07384 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CAPN1P07384 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.97■□□□□ 0.95
CAPN1P07384 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CAPN1P07384 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.96■□□□□ 0.95
CAPN1P07384 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CAPN1P07384 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.96■□□□□ 0.95
CAPN1P07384 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.96■□□□□ 0.95
CAPN1P07384 OR2I1P-207ENST00000453522 948 ntBASIC20.96■□□□□ 0.95
CAPN1P07384 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.96■□□□□ 0.95
CAPN1P07384 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.96■□□□□ 0.95
CAPN1P07384 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.96■□□□□ 0.95
CAPN1P07384 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
CAPN1P07384 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CAPN1P07384 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CAPN1P07384 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CAPN1P07384 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CAPN1P07384 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.96■□□□□ 0.95
CAPN1P07384 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
CAPN1P07384 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.95■□□□□ 0.94
CAPN1P07384 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CAPN1P07384 AL162430.1-201ENST00000480705 870 ntBASIC20.95■□□□□ 0.94
CAPN1P07384 IGHV3-19-201ENST00000521488 291 ntBASIC20.95■□□□□ 0.94
CAPN1P07384 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.95■□□□□ 0.94
CAPN1P07384 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CAPN1P07384 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.95■□□□□ 0.94
CAPN1P07384 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CAPN1P07384 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.94■□□□□ 0.94
CAPN1P07384 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms