Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RB1P06400 AC093787.1-201ENST00000450396 207 ntBASIC22.83■■□□□ 1.25
RB1P06400 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.83■■□□□ 1.25
RB1P06400 AC097658.1-201ENST00000475555 843 ntBASIC22.83■■□□□ 1.25
RB1P06400 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.83■■□□□ 1.25
RB1P06400 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.83■■□□□ 1.25
RB1P06400 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.83■■□□□ 1.25
RB1P06400 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.83■■□□□ 1.25
RB1P06400 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.83■■□□□ 1.25
RB1P06400 AC016405.3-201ENST00000607710 860 ntBASIC22.83■■□□□ 1.25
RB1P06400 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.83■■□□□ 1.25
RB1P06400 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RB1P06400 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RB1P06400 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.83■■□□□ 1.25
RB1P06400 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RB1P06400 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RB1P06400 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RB1P06400 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RB1P06400 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RB1P06400 BX276092.2-201ENST00000417668 665 ntBASIC22.82■■□□□ 1.24
RB1P06400 DUSP5P2-201ENST00000426873 1033 ntBASIC22.82■■□□□ 1.24
RB1P06400 RPS2P52-201ENST00000469610 820 ntBASIC22.82■■□□□ 1.24
RB1P06400 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.82■■□□□ 1.24
RB1P06400 RARRES2P4-201ENST00000514074 484 ntBASIC22.82■■□□□ 1.24
RB1P06400 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RB1P06400 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.82■■□□□ 1.24
RB1P06400 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.82■■□□□ 1.24
RB1P06400 AC120498.10-201ENST00000621827 505 ntBASIC22.82■■□□□ 1.24
RB1P06400 MYC-209ENST00000641252 345 ntBASIC22.82■■□□□ 1.24
RB1P06400 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
RB1P06400 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.82■■□□□ 1.24
RB1P06400 ABCB10P4-201ENST00000566803 2184 ntBASIC22.82■■□□□ 1.24
RB1P06400 LINC01960-201ENST00000563759 1884 ntBASIC22.81■■□□□ 1.24
RB1P06400 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RB1P06400 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RB1P06400 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.81■■□□□ 1.24
RB1P06400 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RB1P06400 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RB1P06400 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.8■■□□□ 1.24
RB1P06400 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RB1P06400 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.8■■□□□ 1.24
RB1P06400 ESRRAP1-201ENST00000400596 1257 ntBASIC22.8■■□□□ 1.24
RB1P06400 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.8■■□□□ 1.24
RB1P06400 AC083880.1-201ENST00000608266 535 ntBASIC22.8■■□□□ 1.24
RB1P06400 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
RB1P06400 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RB1P06400 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.8■■□□□ 1.24
RB1P06400 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RB1P06400 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RB1P06400 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.79■■□□□ 1.24
RB1P06400 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.79■■□□□ 1.24
RB1P06400 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 GCSHP5-201ENST00000443090 522 ntBASIC22.79■■□□□ 1.24
RB1P06400 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
RB1P06400 AC098590.1-201ENST00000468126 897 ntBASIC22.79■■□□□ 1.24
RB1P06400 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.79■■□□□ 1.24
RB1P06400 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.79■■□□□ 1.24
RB1P06400 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 AC008175.2-201ENST00000612840 297 ntBASIC22.79■■□□□ 1.24
RB1P06400 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.79■■□□□ 1.24
RB1P06400 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RB1P06400 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
RB1P06400 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.78■■□□□ 1.24
RB1P06400 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
RB1P06400 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RB1P06400 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
RB1P06400 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
RB1P06400 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
RB1P06400 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.78■■□□□ 1.24
RB1P06400 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.78■■□□□ 1.24
RB1P06400 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.78■■□□□ 1.24
RB1P06400 AL162412.1-201ENST00000567129 965 ntBASIC22.78■■□□□ 1.24
RB1P06400 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.78■■□□□ 1.24
RB1P06400 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
RB1P06400 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
RB1P06400 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
RB1P06400 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
RB1P06400 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.77■■□□□ 1.24
RB1P06400 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.77■■□□□ 1.24
RB1P06400 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.77■■□□□ 1.24
RB1P06400 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms