Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Gm26571-201ENSMUST00000181399 666 ntBASIC17.41■□□□□ 0.38
P06336 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.41■□□□□ 0.38
P06336 AV356131-201ENSMUST00000206201 750 ntBASIC17.41■□□□□ 0.38
P06336 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.41■□□□□ 0.38
P06336 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06336 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.4■□□□□ 0.38
P06336 Gm42569-201ENSMUST00000200539 472 ntBASIC17.4■□□□□ 0.38
P06336 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
P06336 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
P06336 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06336 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
P06336 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P06336 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
P06336 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
P06336 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.39■□□□□ 0.37
P06336 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P06336 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
P06336 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P06336 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.37■□□□□ 0.37
P06336 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
P06336 Gm10849-201ENSMUST00000100397 618 ntBASIC17.37■□□□□ 0.37
P06336 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.37■□□□□ 0.37
P06336 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.37■□□□□ 0.37
P06336 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
P06336 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
P06336 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06336 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.37■□□□□ 0.37
P06336 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
P06336 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
P06336 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.36■□□□□ 0.37
P06336 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06336 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
P06336 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P06336 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P06336 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Gm13534-201ENSMUST00000121169 513 ntBASIC17.35■□□□□ 0.37
P06336 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.35■□□□□ 0.37
P06336 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.35■□□□□ 0.37
P06336 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Gm7514-201ENSMUST00000209475 934 ntBASIC17.35■□□□□ 0.37
P06336 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P06336 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
P06336 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P06336 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
P06336 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms