Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
POLR3DP05423 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
POLR3DP05423 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
POLR3DP05423 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
POLR3DP05423 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
POLR3DP05423 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.58■■□□□ 1.69
POLR3DP05423 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
POLR3DP05423 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
POLR3DP05423 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
POLR3DP05423 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.58■■□□□ 1.69
POLR3DP05423 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.58■■□□□ 1.69
POLR3DP05423 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.58■■□□□ 1.69
POLR3DP05423 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.58■■□□□ 1.69
POLR3DP05423 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.58■■□□□ 1.69
POLR3DP05423 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
POLR3DP05423 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.68
POLR3DP05423 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC25.57■■□□□ 1.68
POLR3DP05423 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
POLR3DP05423 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.57■■□□□ 1.68
POLR3DP05423 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
POLR3DP05423 AC055733.4-201ENST00000638462 1354 ntBASIC25.56■■□□□ 1.68
POLR3DP05423 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.56■■□□□ 1.68
POLR3DP05423 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
POLR3DP05423 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 AC006015.1-201ENST00000429970 570 ntBASIC25.56■■□□□ 1.68
POLR3DP05423 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.56■■□□□ 1.68
POLR3DP05423 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.56■■□□□ 1.68
POLR3DP05423 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.56■■□□□ 1.68
POLR3DP05423 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
POLR3DP05423 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
POLR3DP05423 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
POLR3DP05423 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR3DP05423 AC079834.2-201ENST00000609776 1949 ntBASIC25.55■■□□□ 1.68
POLR3DP05423 KRT87P-202ENST00000534226 1464 ntBASIC25.55■■□□□ 1.68
POLR3DP05423 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR3DP05423 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR3DP05423 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.55■■□□□ 1.68
POLR3DP05423 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.55■■□□□ 1.68
POLR3DP05423 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.55■■□□□ 1.68
POLR3DP05423 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
POLR3DP05423 GUSBP5-202ENST00000510805 1989 ntBASIC25.55■■□□□ 1.68
POLR3DP05423 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 ESRRAP2-201ENST00000418437 1549 ntBASIC25.54■■□□□ 1.68
POLR3DP05423 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.54■■□□□ 1.68
POLR3DP05423 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.54■■□□□ 1.68
POLR3DP05423 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 AL034346.1-201ENST00000568244 1277 ntBASIC25.54■■□□□ 1.68
POLR3DP05423 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
POLR3DP05423 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
POLR3DP05423 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
POLR3DP05423 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
POLR3DP05423 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
POLR3DP05423 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.53■■□□□ 1.68
POLR3DP05423 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.53■■□□□ 1.68
POLR3DP05423 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.53■■□□□ 1.68
POLR3DP05423 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
POLR3DP05423 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
POLR3DP05423 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.53■■□□□ 1.68
POLR3DP05423 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
POLR3DP05423 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.52■■□□□ 1.68
POLR3DP05423 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
POLR3DP05423 AC104187.1-201ENST00000607510 612 ntBASIC25.52■■□□□ 1.68
POLR3DP05423 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
POLR3DP05423 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.52■■□□□ 1.68
POLR3DP05423 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms