Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
MBD4O95243 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MBD4O95243 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.65■■□□□ 1.7
MBD4O95243 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
MBD4O95243 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.64■■□□□ 1.7
MBD4O95243 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
MBD4O95243 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
MBD4O95243 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.64■■□□□ 1.7
MBD4O95243 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.64■■□□□ 1.7
MBD4O95243 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.64■■□□□ 1.7
MBD4O95243 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.64■■□□□ 1.7
MBD4O95243 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.64■■□□□ 1.7
MBD4O95243 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.7
MBD4O95243 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
MBD4O95243 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
MBD4O95243 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
MBD4O95243 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.64■■□□□ 1.69
MBD4O95243 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.63■■□□□ 1.69
MBD4O95243 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
MBD4O95243 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.63■■□□□ 1.69
MBD4O95243 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.63■■□□□ 1.69
MBD4O95243 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC25.63■■□□□ 1.69
MBD4O95243 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MBD4O95243 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
MBD4O95243 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.62■■□□□ 1.69
MBD4O95243 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
MBD4O95243 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.62■■□□□ 1.69
MBD4O95243 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.62■■□□□ 1.69
MBD4O95243 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.62■■□□□ 1.69
MBD4O95243 AC104187.1-201ENST00000607510 612 ntBASIC25.62■■□□□ 1.69
MBD4O95243 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
MBD4O95243 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.61■■□□□ 1.69
MBD4O95243 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
MBD4O95243 AC242852.2-201ENST00000615738 1807 ntBASIC25.6■■□□□ 1.69
MBD4O95243 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MBD4O95243 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.6■■□□□ 1.69
MBD4O95243 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.6■■□□□ 1.69
MBD4O95243 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.6■■□□□ 1.69
MBD4O95243 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.6■■□□□ 1.69
MBD4O95243 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MBD4O95243 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
MBD4O95243 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
MBD4O95243 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MBD4O95243 AC026471.6-201ENST00000622954 1905 ntBASIC25.59■■□□□ 1.69
MBD4O95243 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.59■■□□□ 1.69
MBD4O95243 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
MBD4O95243 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MBD4O95243 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MBD4O95243 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MBD4O95243 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MBD4O95243 KRT19P1-201ENST00000405746 1186 ntBASIC25.59■■□□□ 1.69
MBD4O95243 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.59■■□□□ 1.69
MBD4O95243 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.59■■□□□ 1.69
MBD4O95243 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.59■■□□□ 1.69
MBD4O95243 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MBD4O95243 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
MBD4O95243 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.58■■□□□ 1.69
MBD4O95243 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
MBD4O95243 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.58■■□□□ 1.69
MBD4O95243 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.58■■□□□ 1.69
MBD4O95243 AC137761.2-201ENST00000561729 223 ntBASIC25.58■■□□□ 1.69
MBD4O95243 AC145350.3-201ENST00000569033 163 ntBASIC25.58■■□□□ 1.69
MBD4O95243 AL137784.2-201ENST00000607332 1000 ntBASIC25.58■■□□□ 1.69
MBD4O95243 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MBD4O95243 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.58■■□□□ 1.69
MBD4O95243 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.58■■□□□ 1.68
MBD4O95243 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
MBD4O95243 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
MBD4O95243 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
MBD4O95243 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
MBD4O95243 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
MBD4O95243 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
MBD4O95243 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms