Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFS3O75489 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
NDUFS3O75489 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NDUFS3O75489 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.34■■□□□ 1.01
NDUFS3O75489 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.34■■□□□ 1.01
NDUFS3O75489 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NDUFS3O75489 RASA4CP-201ENST00000424092 1398 ntBASIC21.34■■□□□ 1.01
NDUFS3O75489 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS3O75489 TSPY26P-201ENST00000476365 1326 ntBASIC21.33■■□□□ 1.01
NDUFS3O75489 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFS3O75489 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.33■■□□□ 1.01
NDUFS3O75489 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
NDUFS3O75489 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS3O75489 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.33■■□□□ 1.01
NDUFS3O75489 MIR939-201ENST00000401314 82 ntBASIC21.33■■□□□ 1.01
NDUFS3O75489 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NDUFS3O75489 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.33■■□□□ 1.01
NDUFS3O75489 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.33■■□□□ 1.01
NDUFS3O75489 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.33■■□□□ 1
NDUFS3O75489 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
NDUFS3O75489 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NDUFS3O75489 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
NDUFS3O75489 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.33■■□□□ 1
NDUFS3O75489 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.33■■□□□ 1
NDUFS3O75489 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFS3O75489 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.32■■□□□ 1
NDUFS3O75489 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.32■■□□□ 1
NDUFS3O75489 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFS3O75489 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.32■■□□□ 1
NDUFS3O75489 AC091305.1-201ENST00000479476 895 ntBASIC21.32■■□□□ 1
NDUFS3O75489 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.32■■□□□ 1
NDUFS3O75489 SMUG1P1-201ENST00000590640 811 ntBASIC21.32■■□□□ 1
NDUFS3O75489 AL136967.2-201ENST00000623968 743 ntBASIC21.32■■□□□ 1
NDUFS3O75489 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS3O75489 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NDUFS3O75489 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.32■■□□□ 1
NDUFS3O75489 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.32■■□□□ 1
NDUFS3O75489 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.31■■□□□ 1
NDUFS3O75489 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.31■■□□□ 1
NDUFS3O75489 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.31■■□□□ 1
NDUFS3O75489 AL031432.3-201ENST00000607698 485 ntBASIC21.31■■□□□ 1
NDUFS3O75489 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.31■■□□□ 1
NDUFS3O75489 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.31■■□□□ 1
NDUFS3O75489 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
NDUFS3O75489 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
NDUFS3O75489 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.3■■□□□ 1
NDUFS3O75489 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.3■■□□□ 1
NDUFS3O75489 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.3■■□□□ 1
NDUFS3O75489 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NDUFS3O75489 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NDUFS3O75489 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.3■■□□□ 1
NDUFS3O75489 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.3■■□□□ 1
NDUFS3O75489 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.29■■□□□ 1
NDUFS3O75489 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.29■■□□□ 1
NDUFS3O75489 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.29■■□□□ 1
NDUFS3O75489 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
NDUFS3O75489 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
NDUFS3O75489 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NDUFS3O75489 AC026471.6-201ENST00000622954 1905 ntBASIC21.29■■□□□ 1
NDUFS3O75489 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.29■■□□□ 1
NDUFS3O75489 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NDUFS3O75489 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
NDUFS3O75489 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
NDUFS3O75489 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 SUDS3P1-201ENST00000505831 966 ntBASIC21.28■■□□□ 1
NDUFS3O75489 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
NDUFS3O75489 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.28■■□□□ 1
NDUFS3O75489 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NDUFS3O75489 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
NDUFS3O75489 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms