Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.38■■□□□ 1.01
GPC4O75487 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GPC4O75487 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
GPC4O75487 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.37■■□□□ 1.01
GPC4O75487 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
GPC4O75487 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 AL137060.1-201ENST00000618151 2648 ntBASIC21.37■■□□□ 1.01
GPC4O75487 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.37■■□□□ 1.01
GPC4O75487 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.37■■□□□ 1.01
GPC4O75487 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.37■■□□□ 1.01
GPC4O75487 AC005837.3-201ENST00000612163 286 ntBASIC21.37■■□□□ 1.01
GPC4O75487 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GPC4O75487 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
GPC4O75487 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 RASA4CP-201ENST00000424092 1398 ntBASIC21.36■■□□□ 1.01
GPC4O75487 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 AC087239.1-201ENST00000622671 572 ntBASIC21.36■■□□□ 1.01
GPC4O75487 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.36■■□□□ 1.01
GPC4O75487 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.36■■□□□ 1.01
GPC4O75487 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GPC4O75487 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GPC4O75487 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
GPC4O75487 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GPC4O75487 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
GPC4O75487 AC091305.1-201ENST00000479476 895 ntBASIC21.35■■□□□ 1.01
GPC4O75487 AC126544.1-201ENST00000580842 1059 ntBASIC21.35■■□□□ 1.01
GPC4O75487 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
GPC4O75487 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GPC4O75487 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GPC4O75487 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
GPC4O75487 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
GPC4O75487 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
GPC4O75487 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
GPC4O75487 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.34■■□□□ 1.01
GPC4O75487 AC079089.2-201ENST00000531211 1277 ntBASIC21.34■■□□□ 1.01
GPC4O75487 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
GPC4O75487 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GPC4O75487 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.34■■□□□ 1.01
GPC4O75487 OXCT2P1-201ENST00000447263 1535 ntBASIC21.34■■□□□ 1.01
GPC4O75487 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.34■■□□□ 1.01
GPC4O75487 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.33■■□□□ 1.01
GPC4O75487 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GPC4O75487 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GPC4O75487 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.33■■□□□ 1.01
GPC4O75487 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GPC4O75487 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GPC4O75487 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.33■■□□□ 1
GPC4O75487 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
GPC4O75487 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
GPC4O75487 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.33■■□□□ 1
GPC4O75487 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.32■■□□□ 1
GPC4O75487 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
GPC4O75487 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.32■■□□□ 1
GPC4O75487 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.32■■□□□ 1
GPC4O75487 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.32■■□□□ 1
GPC4O75487 IGHV3-19-201ENST00000521488 291 ntBASIC21.32■■□□□ 1
GPC4O75487 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.32■■□□□ 1
GPC4O75487 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GPC4O75487 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
GPC4O75487 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.32■■□□□ 1
GPC4O75487 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.31■■□□□ 1
GPC4O75487 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.31■■□□□ 1
GPC4O75487 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.31■■□□□ 1
GPC4O75487 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.31■■□□□ 1
GPC4O75487 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms