Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN2BO60939 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN2BO60939 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN2BO60939 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN2BO60939 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN2BO60939 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN2BO60939 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN2BO60939 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SCN2BO60939 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN2BO60939 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCN2BO60939 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.29■□□□□ 0.84
SCN2BO60939 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN2BO60939 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 FEM1AP4-201ENST00000443167 1987 ntBASIC20.28■□□□□ 0.84
SCN2BO60939 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN2BO60939 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.28■□□□□ 0.84
SCN2BO60939 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.28■□□□□ 0.84
SCN2BO60939 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SCN2BO60939 SYT6-210ENST00000641643 1587 ntBASIC20.28■□□□□ 0.84
SCN2BO60939 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.28■□□□□ 0.84
SCN2BO60939 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCN2BO60939 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.27■□□□□ 0.84
SCN2BO60939 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SCN2BO60939 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.27■□□□□ 0.84
SCN2BO60939 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCN2BO60939 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN2BO60939 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.27■□□□□ 0.84
SCN2BO60939 AC087239.1-201ENST00000622671 572 ntBASIC20.27■□□□□ 0.84
SCN2BO60939 AC136469.2-201ENST00000623944 1028 ntBASIC20.27■□□□□ 0.84
SCN2BO60939 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
SCN2BO60939 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCN2BO60939 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCN2BO60939 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.27■□□□□ 0.83
SCN2BO60939 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCN2BO60939 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN2BO60939 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCN2BO60939 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN2BO60939 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCN2BO60939 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN2BO60939 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
SCN2BO60939 AC011298.3-201ENST00000615796 283 ntBASIC20.26■□□□□ 0.83
SCN2BO60939 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.26■□□□□ 0.83
SCN2BO60939 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN2BO60939 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SCN2BO60939 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCN2BO60939 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.26■□□□□ 0.83
SCN2BO60939 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN2BO60939 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN2BO60939 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 AC131281.2-201ENST00000520478 145 ntBASIC20.25■□□□□ 0.83
SCN2BO60939 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN2BO60939 DUX4L19-201ENST00000557448 1267 ntBASIC20.25■□□□□ 0.83
SCN2BO60939 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.25■□□□□ 0.83
SCN2BO60939 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.25■□□□□ 0.83
SCN2BO60939 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN2BO60939 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 AF106564.1-201ENST00000607058 2553 ntBASIC20.25■□□□□ 0.83
SCN2BO60939 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCN2BO60939 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.25■□□□□ 0.83
SCN2BO60939 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SCN2BO60939 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.25■□□□□ 0.83
SCN2BO60939 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN2BO60939 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SCN2BO60939 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCN2BO60939 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN2BO60939 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SCN2BO60939 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
SCN2BO60939 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN2BO60939 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SCN2BO60939 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN2BO60939 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN2BO60939 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN2BO60939 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.23■□□□□ 0.83
SCN2BO60939 AL024507.2-201ENST00000606070 2574 ntBASIC20.23■□□□□ 0.83
SCN2BO60939 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN2BO60939 SLC47A1P1-202ENST00000449666 945 ntBASIC20.23■□□□□ 0.83
SCN2BO60939 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms