Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 OR10C1-204ENST00000622521 1039 ntBASIC20.24■□□□□ 0.83
URB1O60287 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.24■□□□□ 0.83
URB1O60287 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
URB1O60287 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
URB1O60287 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.24■□□□□ 0.83
URB1O60287 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
URB1O60287 OXCT2P1-201ENST00000447263 1535 ntBASIC20.24■□□□□ 0.83
URB1O60287 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
URB1O60287 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
URB1O60287 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.23■□□□□ 0.83
URB1O60287 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
URB1O60287 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
URB1O60287 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
URB1O60287 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.23■□□□□ 0.83
URB1O60287 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.23■□□□□ 0.83
URB1O60287 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.23■□□□□ 0.83
URB1O60287 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.23■□□□□ 0.83
URB1O60287 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
URB1O60287 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
URB1O60287 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
URB1O60287 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.23■□□□□ 0.83
URB1O60287 UBE2SP1-201ENST00000450587 669 ntBASIC20.23■□□□□ 0.83
URB1O60287 AC010141.2-201ENST00000452426 721 ntBASIC20.23■□□□□ 0.83
URB1O60287 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
URB1O60287 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
URB1O60287 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
URB1O60287 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
URB1O60287 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
URB1O60287 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.22■□□□□ 0.83
URB1O60287 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
URB1O60287 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.22■□□□□ 0.83
URB1O60287 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.22■□□□□ 0.83
URB1O60287 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
URB1O60287 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
URB1O60287 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.22■□□□□ 0.83
URB1O60287 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
URB1O60287 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.22■□□□□ 0.83
URB1O60287 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
URB1O60287 TERF1P5-201ENST00000477545 1207 ntBASIC20.22■□□□□ 0.83
URB1O60287 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
URB1O60287 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.21■□□□□ 0.83
URB1O60287 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 AC007322.4-201ENST00000509611 723 ntBASIC20.21■□□□□ 0.83
URB1O60287 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.21■□□□□ 0.83
URB1O60287 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 ABCB10P4-201ENST00000566803 2184 ntBASIC20.21■□□□□ 0.83
URB1O60287 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
URB1O60287 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.21■□□□□ 0.83
URB1O60287 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.21■□□□□ 0.83
URB1O60287 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.2■□□□□ 0.82
URB1O60287 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
URB1O60287 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.2■□□□□ 0.82
URB1O60287 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.2■□□□□ 0.82
URB1O60287 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.2■□□□□ 0.82
URB1O60287 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.2■□□□□ 0.82
URB1O60287 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
URB1O60287 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.2■□□□□ 0.82
URB1O60287 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
URB1O60287 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
URB1O60287 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
URB1O60287 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.19■□□□□ 0.82
URB1O60287 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 AP003097.1-201ENST00000530657 1135 ntBASIC20.19■□□□□ 0.82
URB1O60287 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 MIR4497-201ENST00000583208 89 ntBASIC20.19■□□□□ 0.82
URB1O60287 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
URB1O60287 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.19■□□□□ 0.82
URB1O60287 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
URB1O60287 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
URB1O60287 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.18■□□□□ 0.82
URB1O60287 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms