Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.41■■□□□ 1.98
ABCC4O15439 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCC4O15439 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.41■■□□□ 1.98
ABCC4O15439 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
ABCC4O15439 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
ABCC4O15439 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
ABCC4O15439 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCC4O15439 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCC4O15439 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCC4O15439 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCC4O15439 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCC4O15439 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCC4O15439 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCC4O15439 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCC4O15439 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCC4O15439 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCC4O15439 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.4■■□□□ 1.98
ABCC4O15439 HLA-L-209ENST00000420110 1011 ntBASIC27.4■■□□□ 1.98
ABCC4O15439 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.4■■□□□ 1.98
ABCC4O15439 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC27.4■■□□□ 1.98
ABCC4O15439 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCC4O15439 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
ABCC4O15439 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCC4O15439 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ABCC4O15439 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
ABCC4O15439 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCC4O15439 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCC4O15439 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
ABCC4O15439 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCC4O15439 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCC4O15439 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
ABCC4O15439 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ABCC4O15439 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCC4O15439 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCC4O15439 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCC4O15439 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.39■■□□□ 1.97
ABCC4O15439 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.39■■□□□ 1.97
ABCC4O15439 RAP2CP1-201ENST00000605103 478 ntBASIC27.39■■□□□ 1.97
ABCC4O15439 AC080038.1-201ENST00000611274 1154 ntBASIC27.39■■□□□ 1.97
ABCC4O15439 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
ABCC4O15439 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCC4O15439 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.38■■□□□ 1.97
ABCC4O15439 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCC4O15439 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCC4O15439 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ABCC4O15439 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
ABCC4O15439 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.37■■□□□ 1.97
ABCC4O15439 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 C11orf96-202ENST00000528572 1834 ntBASIC27.37■■□□□ 1.97
ABCC4O15439 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ABCC4O15439 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCC4O15439 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.37■■□□□ 1.97
ABCC4O15439 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
ABCC4O15439 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCC4O15439 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCC4O15439 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
ABCC4O15439 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.36■■□□□ 1.97
ABCC4O15439 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.36■■□□□ 1.97
ABCC4O15439 AC137761.2-201ENST00000561729 223 ntBASIC27.36■■□□□ 1.97
ABCC4O15439 AC145350.3-201ENST00000569033 163 ntBASIC27.36■■□□□ 1.97
ABCC4O15439 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
ABCC4O15439 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCC4O15439 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCC4O15439 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCC4O15439 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCC4O15439 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.35■■□□□ 1.97
ABCC4O15439 AP004607.4-201ENST00000530158 1459 ntBASIC27.35■■□□□ 1.97
ABCC4O15439 MYB-221ENST00000527615 2381 ntTSL 5 BASIC27.35■■□□□ 1.97
ABCC4O15439 STX7-201ENST00000367937 1090 ntTSL 5 BASIC27.35■■□□□ 1.97
ABCC4O15439 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.35■■□□□ 1.97
ABCC4O15439 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
ABCC4O15439 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCC4O15439 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCC4O15439 AC004854.2-201ENST00000608450 1441 ntBASIC27.34■■□□□ 1.97
ABCC4O15439 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCC4O15439 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCC4O15439 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.34■■□□□ 1.97
ABCC4O15439 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCC4O15439 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ABCC4O15439 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCC4O15439 FAM99A-202ENST00000538190 1989 ntBASIC27.34■■□□□ 1.97
ABCC4O15439 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCC4O15439 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms