Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COPEO14579 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.37■■□□□ 1.01
COPEO14579 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COPEO14579 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COPEO14579 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.37■■□□□ 1.01
COPEO14579 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COPEO14579 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.37■■□□□ 1.01
COPEO14579 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COPEO14579 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
COPEO14579 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.36■■□□□ 1.01
COPEO14579 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.36■■□□□ 1.01
COPEO14579 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.36■■□□□ 1.01
COPEO14579 AL157384.1-201ENST00000445995 2473 ntBASIC21.36■■□□□ 1.01
COPEO14579 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COPEO14579 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.36■■□□□ 1.01
COPEO14579 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.35■■□□□ 1.01
COPEO14579 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
COPEO14579 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.35■■□□□ 1.01
COPEO14579 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.35■■□□□ 1.01
COPEO14579 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COPEO14579 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COPEO14579 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COPEO14579 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COPEO14579 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.34■■□□□ 1.01
COPEO14579 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COPEO14579 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
COPEO14579 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COPEO14579 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.33■■□□□ 1.01
COPEO14579 AL451085.2-201ENST00000605085 799 ntBASIC21.33■■□□□ 1.01
COPEO14579 AC241377.3-202ENST00000626088 1088 ntBASIC21.33■■□□□ 1.01
COPEO14579 AC241585.3-202ENST00000628937 1088 ntBASIC21.33■■□□□ 1.01
COPEO14579 AC245100.8-202ENST00000629247 1058 ntBASIC21.33■■□□□ 1.01
COPEO14579 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COPEO14579 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.33■■□□□ 1
COPEO14579 AC133637.1-201ENST00000624115 1537 ntBASIC21.33■■□□□ 1
COPEO14579 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.33■■□□□ 1
COPEO14579 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.33■■□□□ 1
COPEO14579 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
COPEO14579 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.33■■□□□ 1
COPEO14579 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.32■■□□□ 1
COPEO14579 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.32■■□□□ 1
COPEO14579 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
COPEO14579 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.32■■□□□ 1
COPEO14579 AL117332.1-201ENST00000622628 974 ntBASIC21.32■■□□□ 1
COPEO14579 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COPEO14579 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.31■■□□□ 1
COPEO14579 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.31■■□□□ 1
COPEO14579 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 TSPY9P-201ENST00000440215 945 ntBASIC21.31■■□□□ 1
COPEO14579 TSPY11P-201ENST00000442607 1045 ntBASIC21.31■■□□□ 1
COPEO14579 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 LINC01521-201ENST00000504184 1943 ntBASIC21.31■■□□□ 1
COPEO14579 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COPEO14579 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COPEO14579 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.3■■□□□ 1
COPEO14579 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COPEO14579 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COPEO14579 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.3■■□□□ 1
COPEO14579 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.3■■□□□ 1
COPEO14579 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.3■■□□□ 1
COPEO14579 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.3■■□□□ 1
COPEO14579 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COPEO14579 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms