Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
EIF3FO00303 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
EIF3FO00303 AC244015.2-201ENST00000616358 1861 ntBASIC20.98■□□□□ 0.95
EIF3FO00303 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.98■□□□□ 0.95
EIF3FO00303 AC005837.3-201ENST00000612163 286 ntBASIC20.98■□□□□ 0.95
EIF3FO00303 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.98■□□□□ 0.95
EIF3FO00303 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
EIF3FO00303 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.98■□□□□ 0.95
EIF3FO00303 AP006587.3-201ENST00000525742 1516 ntBASIC20.98■□□□□ 0.95
EIF3FO00303 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EIF3FO00303 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3FO00303 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
EIF3FO00303 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
EIF3FO00303 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EIF3FO00303 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.97■□□□□ 0.95
EIF3FO00303 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.97■□□□□ 0.95
EIF3FO00303 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.97■□□□□ 0.95
EIF3FO00303 FBXW4P1-201ENST00000426721 2239 ntBASIC20.97■□□□□ 0.95
EIF3FO00303 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
EIF3FO00303 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3FO00303 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.96■□□□□ 0.95
EIF3FO00303 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.96■□□□□ 0.95
EIF3FO00303 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3FO00303 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.96■□□□□ 0.95
EIF3FO00303 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EIF3FO00303 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
EIF3FO00303 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EIF3FO00303 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3FO00303 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3FO00303 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
EIF3FO00303 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3FO00303 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EIF3FO00303 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.95■□□□□ 0.94
EIF3FO00303 MIR638-201ENST00000385237 100 ntBASIC20.95■□□□□ 0.94
EIF3FO00303 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.95■□□□□ 0.94
EIF3FO00303 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EIF3FO00303 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.95■□□□□ 0.94
EIF3FO00303 AC012414.1-201ENST00000556676 535 ntBASIC20.95■□□□□ 0.94
EIF3FO00303 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.95■□□□□ 0.94
EIF3FO00303 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3FO00303 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3FO00303 BX005040.4-201ENST00000637145 1518 ntBASIC20.94■□□□□ 0.94
EIF3FO00303 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.94■□□□□ 0.94
EIF3FO00303 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3FO00303 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3FO00303 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EIF3FO00303 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.94■□□□□ 0.94
EIF3FO00303 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.94■□□□□ 0.94
EIF3FO00303 AL354811.1-201ENST00000610286 706 ntBASIC20.94■□□□□ 0.94
EIF3FO00303 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.94■□□□□ 0.94
EIF3FO00303 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
EIF3FO00303 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3FO00303 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3FO00303 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EIF3FO00303 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.94■□□□□ 0.94
EIF3FO00303 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EIF3FO00303 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
EIF3FO00303 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.93■□□□□ 0.94
EIF3FO00303 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.93■□□□□ 0.94
EIF3FO00303 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
EIF3FO00303 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.93■□□□□ 0.94
EIF3FO00303 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.93■□□□□ 0.94
EIF3FO00303 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EIF3FO00303 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.93■□□□□ 0.94
EIF3FO00303 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.93■□□□□ 0.94
EIF3FO00303 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.93■□□□□ 0.94
EIF3FO00303 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 AC026471.6-201ENST00000622954 1905 ntBASIC20.92■□□□□ 0.94
EIF3FO00303 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 AL358852.1-201ENST00000623174 1268 ntBASIC20.92■□□□□ 0.94
EIF3FO00303 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.92■□□□□ 0.94
EIF3FO00303 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EIF3FO00303 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.91■□□□□ 0.94
EIF3FO00303 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.91■□□□□ 0.94
EIF3FO00303 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.91■□□□□ 0.94
EIF3FO00303 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EIF3FO00303 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms