Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 OXCT2P1-201ENST00000447263 1535 ntBASIC17.1■□□□□ 0.33
CGB1A6NKQ9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CGB1A6NKQ9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.09■□□□□ 0.33
CGB1A6NKQ9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.08■□□□□ 0.33
CGB1A6NKQ9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CGB1A6NKQ9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.08■□□□□ 0.33
CGB1A6NKQ9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CGB1A6NKQ9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 AL136116.3-201ENST00000402907 1138 ntBASIC17.08■□□□□ 0.32
CGB1A6NKQ9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 AC087239.1-201ENST00000622671 572 ntBASIC17.08■□□□□ 0.32
CGB1A6NKQ9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CGB1A6NKQ9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CGB1A6NKQ9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 AP005435.1-201ENST00000529293 1178 ntBASIC17.06■□□□□ 0.32
CGB1A6NKQ9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CGB1A6NKQ9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms