Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 RAP2CP1-202ENST00000605179 643 ntBASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RBFOX3A6NFN3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 OXCT2P1-201ENST00000447263 1535 ntBASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 ECEL1P2-201ENST00000461596 1295 ntBASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RBFOX3A6NFN3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RBFOX3A6NFN3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 MIR3648-2-201ENST00000581792 180 ntBASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 MIR3648-1-201ENST00000615959 180 ntBASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 PCDHAC2-203ENST00000615316 3011 ntBASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.86■□□□□ 0.29
RBFOX3A6NFN3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RBFOX3A6NFN3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms